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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3121 A_BomoMSG_c13449_g1_i1
881bp
FPKM:3.44 TPM:1.79
3122 A_BomoMSG_c1344_g1_i1
340bp
FPKM:4.42 TPM:2.30
3123 A_BomoMSG_c13450_g1_i1
276bp
FPKM:1.90 TPM:0.99
3124 A_BomoMSG_c13450_g2_i1
203bp
FPKM:2.11 TPM:1.10
3125 A_BomoMSG_c13451_g1_i1
459bp
FPKM:1.94 TPM:1.01
3126 A_BomoMSG_c13452_g1_i1
397bp
 sperm-associated_antigen_6_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007286 P spermatid development
GO:0015630 C microtubule cytoskeleton
GO:0030030 P cell projection organization
GO:0031514 C motile cilium
GO:0042995 C cell projection
FPKM:4.61 TPM:2.40
3127 A_BomoMSG_c13453_g1_i1
250bp
 tyrosine-protein_phosphatase_[Bombyx_mori]
FPKM:9.50 TPM:4.94
3128 A_BomoMSG_c13454_g1_i1
213bp
 cap-specific_mRNA_(nucleoside-2'-O-)-methyltransferase_2_isoform_X1_[Bombyx_mori]
FPKM:8.18 TPM:4.26
3129 A_BomoMSG_c13455_g1_i1
565bp
 uncharacterized_protein_LOC101736946_[Bombyx_mori]
GO:0005576 C extracellular region
FPKM:23.24 TPM:12.09
3130 A_BomoMSG_c13456_g1_i1
355bp
 uncharacterized_protein_LOC105841473_[Bombyx_mori]
GO:0000002 P mitochondrial genome maintenance
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005657 C replication fork
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0010521 F telomerase inhibitor activity
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0017116 F single-stranded DNA helicase activity
GO:0032211 P negative regulation of telomere maintenance via telomerase
GO:0032508 P DNA duplex unwinding
GO:0035861 C site of double-strand break
GO:0043141 F 5'-3' DNA helicase activity
GO:0043504 P mitochondrial DNA repair
GO:0044806 P G-quadruplex DNA unwinding
GO:0051974 P negative regulation of telomerase activity
GO:1902983 P DNA strand elongation involved in mitotic DNA replication
GO:1903469 P removal of RNA primer involved in mitotic DNA replication
FPKM:2.05 TPM:1.06
3131 A_BomoMSG_c13458_g1_i1
321bp
FPKM:4.21 TPM:2.19
3132 A_BomoMSG_c13459_g1_i1
228bp
FPKM:9.01 TPM:4.68
3133 A_BomoMSG_c1345_g1_i1
284bp
FPKM:2.68 TPM:1.39
3134 A_BomoMSG_c13460_g1_i1
595bp
FPKM:3.90 TPM:2.03
3135 A_BomoMSG_c13461_g1_i1
257bp
 unconventional_myosin-XVIIIa_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005856 C cytoskeleton
GO:0006259 P DNA metabolic process
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016459 C myosin complex
GO:0016477 P cell migration
GO:0016887 F ATP hydrolysis activity
GO:0031032 P actomyosin structure organization
GO:0042641 C actomyosin
GO:0043066 P negative regulation of apoptotic process
GO:0043531 F ADP binding
GO:0044822 F RNA binding
GO:0048194 P Golgi vesicle budding
GO:0050714 P positive regulation of protein secretion
GO:0051015 F actin filament binding
GO:0090161 P Golgi ribbon formation
GO:0090164 P asymmetric Golgi ribbon formation
FPKM:3.34 TPM:1.74
3136 A_BomoMSG_c13462_g1_i1
461bp
FPKM:9.25 TPM:4.81
3137 A_BomoMSG_c13463_g1_i1
434bp
FPKM:6.12 TPM:3.18
3138 A_BomoMSG_c13465_g1_i1
255bp
FPKM:1.70 TPM:0.88
3139 A_BomoMSG_c13466_g1_i1
355bp
FPKM:6.14 TPM:3.19
3140 A_BomoMSG_c13467_g1_i1
492bp
 LOW_QUALITY_PROTEIN:_neuroblastoma-amplified_sequence_[Bombyx_mori]
FPKM:2.81 TPM:1.46
3141 A_BomoMSG_c13467_g1_i2
356bp
 LOW_QUALITY_PROTEIN:_neuroblastoma-amplified_sequence_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0070939 C Dsl1/NZR complex
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
FPKM:0.86 TPM:0.45
3142 A_BomoMSG_c13468_g1_i1
611bp
 LOW_QUALITY_PROTEIN:_TBC1_domain_family_member_31_[Bombyx_mori]
GO:0005813 C centrosome
FPKM:3.38 TPM:1.76
3143 A_BomoMSG_c13469_g1_i1
785bp
 protein_unc-119_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0007399 P nervous system development
GO:0008289 F lipid binding
GO:0015031 P protein transport
FPKM:3.77 TPM:1.96
3144 A_BomoMSG_c13470_g1_i1
234bp
FPKM:2.80 TPM:1.46
3145 A_BomoMSG_c13471_g1_i1
622bp
 monocarboxylate_transporter_14_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0015129 F lactate transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035879 P plasma membrane lactate transport
GO:0055085 P transmembrane transport
FPKM:3.68 TPM:1.91
3146 A_BomoMSG_c13472_g1_i1
733bp
 protein_FAM136A_[Bombyx_mori]
FPKM:17.67 TPM:9.19
3147 A_BomoMSG_c13473_g1_i1
503bp
 multiple_epidermal_growth_factor-like_domains_protein_8_[Bombyx_mori]
GO:0003143 P embryonic heart tube morphogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007368 P determination of left/right symmetry
GO:0010468 P regulation of gene expression
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030326 P embryonic limb morphogenesis
GO:0030509 P BMP signaling pathway
GO:0035108 P limb morphogenesis
GO:0042074 P cell migration involved in gastrulation
GO:0048704 P embryonic skeletal system morphogenesis
GO:0048842 P positive regulation of axon extension involved in axon guidance
GO:0055113 P epiboly involved in gastrulation with mouth forming second
GO:0060971 P embryonic heart tube left/right pattern formation
GO:0060972 P left/right pattern formation
GO:0060976 P coronary vasculature development
GO:0061371 P determination of heart left/right asymmetry
GO:0070062 C extracellular exosome
GO:0071907 P determination of digestive tract left/right asymmetry
GO:0097094 P craniofacial suture morphogenesis
GO:0097155 P fasciculation of sensory neuron axon
FPKM:3.39 TPM:1.77
3148 A_BomoMSG_c13474_g1_i1
367bp
FPKM:0.83 TPM:0.43
3149 A_BomoMSG_c13475_g1_i1
218bp
FPKM:1.70 TPM:0.88
3150 A_BomoMSG_c13476_g1_i1
2036bp
 PREDICTED:_rho_GDP-dissociation_inhibitor_1_[Amyelois_transitella]
GO:0005094 F Rho GDP-dissociation inhibitor activity
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0050790 P regulation of catalytic activity
GO:0071526 P semaphorin-plexin signaling pathway
FPKM:48.03 TPM:24.99
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