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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
451 A_BomoASG_c10642_g1_i1
411bp
FPKM:3.90 TPM:2.99
452 A_BomoASG_c10643_g1_i1
603bp
 PREDICTED:_uncharacterized_protein_LOC106140897_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.92 TPM:0.71
453 A_BomoASG_c10649_g1_i1
288bp
FPKM:0.87 TPM:0.67
454 A_BomoASG_c10650_g1_i1
433bp
 protein_PFC0760c_[Bombyx_mori]
FPKM:0.85 TPM:0.65
455 A_BomoASG_c10654_g1_i1
250bp
FPKM:3.01 TPM:2.31
456 A_BomoASG_c10655_g1_i1
1248bp
 nuclear_pore_complex_protein_Nup205_[Bombyx_mori]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
FPKM:4.53 TPM:3.48
457 A_BomoASG_c10656_g1_i1
278bp
FPKM:2.36 TPM:1.81
458 A_BomoASG_c10657_g1_i1
618bp
 eIF-2-alpha_kinase_GCN2_isoform_X1_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0002250 P adaptive immune response
GO:0002286 P T cell activation involved in immune response
GO:0002376 P immune system process
GO:0002821 P positive regulation of adaptive immune response
GO:0003723 F RNA binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004694 F eukaryotic translation initiation factor 2alpha kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0007399 P nervous system development
GO:0007612 P learning
GO:0007616 P long-term memory
GO:0010998 P regulation of translational initiation by eIF2 alpha phosphorylation
GO:0016032 P viral process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019081 P viral translation
GO:0022626 C cytosolic ribosome
GO:0032057 P negative regulation of translational initiation in response to stress
GO:0032792 P negative regulation of CREB transcription factor activity
GO:0034198 P cellular response to amino acid starvation
GO:0034644 P cellular response to UV
GO:0036492 P eiF2alpha phosphorylation in response to endoplasmic reticulum stress
GO:0039520 P induction by virus of host autophagy
GO:0044828 P negative regulation by host of viral genome replication
GO:0045665 P negative regulation of neuron differentiation
GO:0045947 P negative regulation of translational initiation
GO:0046777 P protein autophosphorylation
GO:0051607 P defense response to virus
GO:0060259 P regulation of feeding behavior
GO:0060733 P GCN2-mediated signaling
GO:0070417 P cellular response to cold
GO:0071264 P positive regulation of translational initiation in response to starvation
GO:1900273 P positive regulation of long-term synaptic potentiation
GO:1990138 P neuron projection extension
GO:1990253 P cellular response to leucine starvation
FPKM:4.20 TPM:3.22
459 A_BomoASG_c10658_g1_i1
205bp
FPKM:3.14 TPM:2.41
460 A_BomoASG_c10659_g1_i1
273bp
 GTPase-activating_Rap/Ran-GAP_domain-like_protein_3_isoform_X3_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
FPKM:1.47 TPM:1.13
461 A_BomoASG_c1065_g1_i1
249bp
FPKM:0.00 TPM:0.00
462 A_BomoASG_c10660_g1_i1
449bp
FPKM:4.20 TPM:3.22
463 A_BomoASG_c10664_g1_i1
329bp
FPKM:2.69 TPM:2.06
464 A_BomoASG_c10666_g1_i1
405bp
 muscle_M-line_assembly_protein_unc-89_isoform_X2_[Bombyx_mori]
FPKM:1.41 TPM:1.08
465 A_BomoASG_c10667_g1_i1
296bp
FPKM:3.30 TPM:2.53
466 A_BomoASG_c10669_g1_i1
254bp
FPKM:5.22 TPM:4.00
467 A_BomoASG_c10670_g1_i1
270bp
FPKM:14.08 TPM:10.80
468 A_BomoASG_c10671_g1_i1
350bp
FPKM:5.71 TPM:4.38
469 A_BomoASG_c10672_g1_i1
1146bp
 probable_ubiquitin_carboxyl-terminal_hydrolase_creB_[Bombyx_mori]
FPKM:2.02 TPM:1.55
470 A_BomoASG_c10674_g1_i1
268bp
 LOW_QUALITY_PROTEIN:_putative_thiamine_transporter_SLC35F3_[Bombyx_mori]
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:2.56 TPM:1.96
471 A_BomoASG_c10675_g1_i1
272bp
FPKM:1.98 TPM:1.52
472 A_BomoASG_c10676_g1_i1
356bp
FPKM:2.62 TPM:2.01
473 A_BomoASG_c10677_g1_i1
415bp
 endoplasmic_reticulum_metallopeptidase_1_isoform_X8_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
FPKM:1.13 TPM:0.87
474 A_BomoASG_c10678_g1_i1
903bp
 CD151_antigen_isoform_X1_[Bombyx_mori]
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005604 C basement membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016477 P cell migration
GO:0031581 P hemidesmosome assembly
GO:0042098 P T cell proliferation
FPKM:2.29 TPM:1.75
475 A_BomoASG_c10679_g1_i1
243bp
 peroxisomal_N(1)-acetyl-spermine/spermidine_oxidase_[Bombyx_mori]
FPKM:1.94 TPM:1.49
476 A_BomoASG_c1067_g1_i1
251bp
FPKM:5.10 TPM:3.91
477 A_BomoASG_c10680_g1_i1
376bp
FPKM:3.45 TPM:2.65
478 A_BomoASG_c10681_g1_i1
296bp
 histone-lysine_N-methyltransferase_SETD1_isoform_X2_[Bombyx_mori]
FPKM:4.13 TPM:3.17
479 A_BomoASG_c10682_g1_i1
281bp
FPKM:1.38 TPM:1.06
480 A_BomoASG_c10683_g1_i1
262bp
FPKM:2.15 TPM:1.65
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