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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
421 A_BomoASG_c10601_g1_i1
778bp
 ashwin-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008150 P biological_process
GO:0048598 P embryonic morphogenesis
GO:0072669 C tRNA-splicing ligase complex
FPKM:26.76 TPM:20.53
422 A_BomoASG_c10603_g1_i1
524bp
FPKM:2.55 TPM:1.96
423 A_BomoASG_c10604_g1_i1
267bp
FPKM:1.55 TPM:1.19
424 A_BomoASG_c10605_g1_i1
249bp
FPKM:1.22 TPM:0.93
425 A_BomoASG_c10607_g1_i1
648bp
 uncharacterized_protein_LOC101741429_[Bombyx_mori]
FPKM:1.91 TPM:1.47
426 A_BomoASG_c10608_g1_i1
390bp
FPKM:3.74 TPM:2.87
427 A_BomoASG_c10610_g1_i1
278bp
FPKM:6.13 TPM:4.70
428 A_BomoASG_c10611_g1_i1
226bp
FPKM:2.35 TPM:1.80
429 A_BomoASG_c10612_g1_i1
735bp
 MATH_and_LRR_domain-containing_protein_PFE0570w_[Bombyx_mori]
FPKM:2.03 TPM:1.56
430 A_BomoASG_c10614_g1_i1
208bp
FPKM:2.00 TPM:1.53
431 A_BomoASG_c10615_g1_i1
311bp
FPKM:1.12 TPM:0.86
432 A_BomoASG_c10616_g1_i1
264bp
FPKM:1.59 TPM:1.22
433 A_BomoASG_c10617_g1_i1
530bp
FPKM:2.98 TPM:2.29
434 A_BomoASG_c10619_g1_i1
255bp
FPKM:4.02 TPM:3.08
435 A_BomoASG_c10621_g1_i1
201bp
FPKM:11.17 TPM:8.56
436 A_BomoASG_c10622_g1_i1
515bp
 uncharacterized_protein_LOC101742755_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004601 F peroxidase activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0030198 P extracellular matrix organization
GO:0042744 P hydrogen peroxide catabolic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
FPKM:3.10 TPM:2.38
437 A_BomoASG_c10623_g1_i1
347bp
 maltase_A1_[Bombyx_mori]
GO:0000023 P maltose metabolic process
GO:0003824 F catalytic activity
GO:0004558 F alpha-1,4-glucosidase activity
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0032450 F maltose alpha-glucosidase activity
GO:0043169 F cation binding
FPKM:1.22 TPM:0.94
438 A_BomoASG_c10626_g1_i1
548bp
 18_wheeler_precursor_[Bombyx_mori]
GO:0001530 F lipopolysaccharide binding
GO:0001875 F lipopolysaccharide immune receptor activity
GO:0002224 P toll-like receptor signaling pathway
GO:0002376 P immune system process
GO:0002755 P MyD88-dependent toll-like receptor signaling pathway
GO:0004888 F transmembrane signaling receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006954 P inflammatory response
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031663 P lipopolysaccharide-mediated signaling pathway
GO:0032497 P detection of lipopolysaccharide
GO:0034142 P toll-like receptor 4 signaling pathway
GO:0042116 P macrophage activation
GO:0045087 P innate immune response
GO:0046696 C lipopolysaccharide receptor complex
GO:0050702 P interleukin-1 beta production
GO:0050707 P regulation of cytokine production
GO:0050829 P defense response to Gram-negative bacterium
GO:1900227 P positive regulation of NLRP3 inflammasome complex assembly
FPKM:2.54 TPM:1.95
439 A_BomoASG_c10627_g1_i1
311bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:3.37 TPM:2.58
440 A_BomoASG_c10629_g1_i1
733bp
 probable_ATP-dependent_RNA_helicase_spindle-E_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
GO:0046872 F metal ion binding
GO:0051321 P meiotic cell cycle
FPKM:3.36 TPM:2.58
441 A_BomoASG_c1062_g1_i1
260bp
 transient_receptor_potential_cation_channel_subfamily_A_member_1_isoform_X1_[Bombyx_mori]
GO:0001580 P detection of chemical stimulus involved in sensory perception of bitter taste
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006816 P calcium ion transport
GO:0007602 P phototransduction
GO:0007638 P mechanosensory behavior
GO:0009408 P response to heat
GO:0009416 P response to light stimulus
GO:0010378 P temperature compensation of the circadian clock
GO:0015276 F ligand-gated ion channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
GO:0023041 P neuronal signal transduction
GO:0033038 F bitter taste receptor activity
GO:0034220 P ion transmembrane transport
GO:0034605 P cellular response to heat
GO:0034703 C cation channel complex
GO:0040040 P thermosensory behavior
GO:0043052 P thermotaxis
GO:0046957 P negative phototaxis
GO:0050850 P positive regulation of calcium-mediated signaling
GO:0050896 P response to stimulus
GO:0050960 P detection of temperature stimulus involved in thermoception
GO:0050965 P detection of temperature stimulus involved in sensory perception of pain
GO:0050968 P detection of chemical stimulus involved in sensory perception of pain
GO:0055085 P transmembrane transport
GO:0097604 F temperature-gated cation channel activity
GO:0098655 P cation transmembrane transport
FPKM:1.64 TPM:1.26
442 A_BomoASG_c10630_g1_i1
336bp
 uncharacterized_protein_LOC105841303_isoform_X1_[Bombyx_mori]
FPKM:1.62 TPM:1.24
443 A_BomoASG_c10631_g1_i1
203bp
FPKM:8.65 TPM:6.63
444 A_BomoASG_c10632_g1_i1
392bp
FPKM:4.46 TPM:3.42
445 A_BomoASG_c10634_g1_i1
976bp
 zinc_finger_protein_511_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:30.72 TPM:23.56
446 A_BomoASG_c10635_g1_i1
368bp
FPKM:0.83 TPM:0.63
447 A_BomoASG_c10637_g1_i1
394bp
FPKM:1.96 TPM:1.51
448 A_BomoASG_c10638_g1_i1
343bp
FPKM:3.74 TPM:2.87
449 A_BomoASG_c10640_g1_i1
405bp
FPKM:1.17 TPM:0.90
450 A_BomoASG_c10641_g1_i1
461bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.11 TPM:1.62
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