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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

4501

A_BomoASG_c15431_g1_i1

381bp

Bomo_Chr23

uncharacterized_protein_LOC101736348_[Bombyx_mori]

FPKM:1.56 TPM:1.19

4502

A_BomoASG_c15433_g1_i1

1153bp

Bomo_Chr21

mortality_factor_4-like_[Bombyx_mori]

GO:0000724	P	double-strand break repair via homologous recombination
GO:0003682	F	chromatin binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0006281	P	DNA repair
GO:0006310	P	DNA recombination
GO:0006338	P	chromatin remodeling
GO:0006342	P	heterochromatin assembly
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006974	P	cellular response to DNA damage stimulus
GO:0008283	P	cell population proliferation
GO:0016568	P	chromatin organization
GO:0016575	P	histone deacetylation
GO:0016580	C	Sin3 complex
GO:0035267	C	NuA4 histone acetyltransferase complex
GO:0040008	P	regulation of growth
GO:0043967	P	histone H4 acetylation
GO:0043968	P	histone H2A acetylation
GO:0047485	F	protein N-terminus binding

FPKM:27.30 TPM:20.94

4503

A_BomoASG_c15434_g1_i1

206bp

Bomo_Chr3

uncharacterized_protein_LOC101744165_[Bombyx_mori]

FPKM:0.00 TPM:0.00

4504

A_BomoASG_c15435_g1_i1

365bp

Bomo_Chr11

FPKM:2.06 TPM:1.58

4505

A_BomoASG_c15435_g1_i2

385bp

Bomo_Chr11

FPKM:3.22 TPM:2.47

4506

A_BomoASG_c15436_g1_i1

206bp

Bomo_Chr28

FPKM:1.03 TPM:0.79

4507

A_BomoASG_c15436_g2_i1

3227bp

Bomo_Chr28

uncharacterized_protein_LOC101739898_isoform_X1_[Bombyx_mori]

GO:0000293	F	ferric-chelate reductase activity
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016491	F	oxidoreductase activity
GO:0046872	F	metal ion binding
GO:0055114	P	obsolete oxidation-reduction process

FPKM:72.51 TPM:55.62

4508

A_BomoASG_c15437_g1_i1

663bp

Bomo_Chr1

succinate_dehydrogenase_assembly_factor_3,_mitochondrial_[Bombyx_mori]

GO:0005739	C	mitochondrion
GO:0005759	C	mitochondrial matrix
GO:0006105	P	succinate metabolic process
GO:0006979	P	response to oxidative stress
GO:0050881	P	musculoskeletal movement
GO:0055093	P	response to hyperoxia

FPKM:1.62 TPM:1.24

4509

A_BomoASG_c15438_g1_i1

327bp

Bomo_Chr16

FPKM:3.74 TPM:2.87

4510

A_BomoASG_c1543_g1_i1

369bp

Bomo_Chr15

nitric_oxide-associated_protein_1_[Bombyx_mori]

FPKM:2.47 TPM:1.89

4511

A_BomoASG_c15442_g1_i1

224bp

Bomo_Chr9

FPKM:3.21 TPM:2.46

4512

A_BomoASG_c15443_g1_i1

226bp

Bomo_Chr1

FPKM:4.70 TPM:3.61

4513

A_BomoASG_c15446_g1_i1

406bp

Bomo_Chr8

FPKM:19.17 TPM:14.71

4514

A_BomoASG_c15447_g1_i1

618bp

Bomo_Chr27

Uncharacterized_protein_OBRU01_10041_[Operophtera_brumata]

GO:0003676	F	nucleic acid binding
GO:0003964	F	RNA-directed DNA polymerase activity
GO:0004190	F	aspartic-type endopeptidase activity
GO:0004518	F	nuclease activity
GO:0004519	F	endonuclease activity
GO:0006278	P	RNA-dependent DNA biosynthetic process
GO:0006508	P	proteolysis
GO:0008233	F	peptidase activity
GO:0015074	P	DNA integration
GO:0016740	F	transferase activity
GO:0016779	F	nucleotidyltransferase activity
GO:0016787	F	hydrolase activity
GO:0090305	P	nucleic acid phosphodiester bond hydrolysis

FPKM:1.78 TPM:1.37

4515

A_BomoASG_c15448_g1_i1

289bp

Bomo_Chr3

Interferon-inducible_double_stranded_RNA-dependent_protein_kinase_activator_A_[Papilio_xuthus]

FPKM:12.15 TPM:9.32

4516

A_BomoASG_c1544_g1_i1

247bp

Bomo_Chr23

FPKM:1.24 TPM:0.95

4517

A_BomoASG_c15450_g1_i1

534bp

Bomo_Chr20

zinc_finger_protein_660-like_[Bombyx_mori]

GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0005622	C	intracellular anatomical structure
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0046872	F	metal ion binding

FPKM:3.57 TPM:2.74

4518

A_BomoASG_c15451_g1_i1

354bp

Bomo_Chr8

FPKM:5.00 TPM:3.84

4519

A_BomoASG_c15452_g1_i1

228bp

Bomo_Chr21

putative_RNA-directed_DNA_polymerase_from_transposon_BS_[Papilio_xuthus]

FPKM:2.29 TPM:1.76

4520

A_BomoASG_c15453_g1_i1

961bp

Bomo_Chr12

FPKM:3.00 TPM:2.30

4521

A_BomoASG_c15454_g1_i1

223bp

Bomo_Chr25

FPKM:1.63 TPM:1.25

4522

A_BomoASG_c15455_g1_i1

1019bp

Bomo_Chr17

putative_inorganic_phosphate_cotransporter_[Bombyx_mori]

GO:0005313	F	L-glutamate transmembrane transporter activity
GO:0006810	P	transport
GO:0006811	P	ion transport
GO:0006814	P	sodium ion transport
GO:0006836	P	neurotransmitter transport
GO:0015293	F	symporter activity
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0030054	C	cell junction
GO:0030672	C	synaptic vesicle membrane
GO:0031410	C	cytoplasmic vesicle
GO:0043005	C	neuron projection
GO:0045202	C	synapse
GO:0050803	P	regulation of synapse structure or activity
GO:0050957	P	equilibrioception
GO:0055085	P	transmembrane transport
GO:0060005	P	vestibular reflex
GO:0089711	P	L-glutamate transmembrane transport

FPKM:4.16 TPM:3.19

4523

A_BomoASG_c15459_g1_i1

458bp

Bomo_Chr9

FPKM:2.91 TPM:2.23

4524

A_BomoASG_c1545_g1_i1

257bp

Bomo_Chr13

FPKM:0.56 TPM:0.43

4525

A_BomoASG_c1545_g2_i1

227bp

Bomo_Chr13

FPKM:0.77 TPM:0.59

4526

A_BomoASG_c15460_g1_i1

424bp

Bomo_Chr4

FPKM:4.37 TPM:3.35

4527

A_BomoASG_c15464_g1_i1

407bp

Bomo_Chr1

FPKM:1.40 TPM:1.07

4528

A_BomoASG_c15467_g1_i1

751bp

Bomo_Chr21

dynein_heavy_chain,_cytoplasmic_[Helicoverpa_armigera]

GO:0000166	F	nucleotide binding
GO:0000776	C	kinetochore
GO:0003774	F	cytoskeletal motor activity
GO:0003777	F	microtubule motor activity
GO:0005524	F	ATP binding
GO:0005737	C	cytoplasm
GO:0005739	C	mitochondrion
GO:0005794	C	Golgi apparatus
GO:0005856	C	cytoskeleton
GO:0005868	C	cytoplasmic dynein complex
GO:0005874	C	microtubule
GO:0005875	C	microtubule associated complex
GO:0005938	C	cell cortex
GO:0006886	P	intracellular protein transport
GO:0007018	P	microtubule-based movement
GO:0007051	P	spindle organization
GO:0007052	P	mitotic spindle organization
GO:0007067	P	mitotic cell cycle
GO:0007098	P	centrosome cycle
GO:0007279	P	pole cell formation
GO:0007282	P	cystoblast division
GO:0007294	P	germarium-derived oocyte fate determination
GO:0007298	P	border follicle cell migration
GO:0007301	P	female germline ring canal formation
GO:0007312	P	oocyte nucleus migration involved in oocyte dorsal/ventral axis specification
GO:0007349	P	cellularization
GO:0007405	P	neuroblast proliferation
GO:0008088	P	axo-dendritic transport
GO:0008090	P	retrograde axonal transport
GO:0008298	P	intracellular mRNA localization
GO:0008569	F	minus-end-directed microtubule motor activity
GO:0016319	P	mushroom body development
GO:0016887	F	ATP hydrolysis activity
GO:0030071	P	regulation of mitotic metaphase/anaphase transition
GO:0030286	C	dynein complex
GO:0030529	C	ribonucleoprotein complex
GO:0030723	P	ovarian fusome organization
GO:0034063	P	stress granule assembly
GO:0034501	P	protein localization to kinetochore
GO:0035011	P	melanotic encapsulation of foreign target
GO:0040001	P	establishment of mitotic spindle localization
GO:0040003	P	chitin-based cuticle development
GO:0042623	F	ATP hydrolysis activity
GO:0043005	C	neuron projection
GO:0045169	C	fusome
GO:0045172	C	germline ring canal
GO:0045197	P	establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198	P	establishment of epithelial cell apical/basal polarity
GO:0045478	P	fusome organization
GO:0045505	F	dynein intermediate chain binding
GO:0046604	P	positive regulation of mitotic centrosome separation
GO:0047497	P	mitochondrion transport along microtubule
GO:0048134	P	germ-line cyst formation
GO:0048311	P	mitochondrion distribution
GO:0048477	P	oogenesis
GO:0048813	P	dendrite morphogenesis
GO:0050658	P	RNA transport
GO:0051237	P	maintenance of RNA location
GO:0051642	P	centrosome localization
GO:0051683	P	establishment of Golgi localization
GO:0051959	F	dynein light intermediate chain binding
GO:1904115	C	axon cytoplasm
GO:1904801	P	positive regulation of neuron remodeling