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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4261 A_BomoASG_c1515_g1_i1
312bp
 putative_fatty_acyl-CoA_reductase_CG5065_isoform_X2_[Bombyx_mori]
FPKM:1.12 TPM:0.86
4262 A_BomoASG_c15160_g1_i1
1173bp
 uncharacterized_protein_LOC101741240_isoform_X1_[Bombyx_mori]
FPKM:55.21 TPM:42.35
4263 A_BomoASG_c15161_g1_i1
402bp
FPKM:6.65 TPM:5.10
4264 A_BomoASG_c15162_g1_i1
223bp
FPKM:5.69 TPM:4.37
4265 A_BomoASG_c15163_g1_i1
391bp
 PREDICTED:_putative_nuclease_HARBI1_[Papilio_machaon]
FPKM:2.49 TPM:1.91
4266 A_BomoASG_c15164_g1_i1
621bp
FPKM:4.80 TPM:3.68
4267 A_BomoASG_c15165_g1_i1
794bp
FPKM:1.84 TPM:1.41
4268 A_BomoASG_c15166_g1_i1
243bp
FPKM:1.29 TPM:0.99
4269 A_BomoASG_c15169_g1_i1
565bp
 nesprin-1_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
FPKM:3.01 TPM:2.31
4270 A_BomoASG_c1516_g1_i1
248bp
FPKM:3.69 TPM:2.83
4271 A_BomoASG_c15171_g1_i1
791bp
 transcription_factor_TFIIIB_component_B''_[Bombyx_mori]
FPKM:2.96 TPM:2.27
4272 A_BomoASG_c15172_g1_i1
768bp
 ATP_binding_protein_[Bombyx_mori]
FPKM:5.09 TPM:3.91
4273 A_BomoASG_c15174_g1_i1
760bp
 vesicle_transport_through_interaction_with_t-SNAREs_homolog_1A_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005776 C autophagosome
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0006896 P Golgi to vacuole transport
GO:0006914 P autophagy
GO:0008021 C synaptic vesicle
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016192 P vesicle-mediated transport
GO:0030136 C clathrin-coated vesicle
GO:0031201 C SNARE complex
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0032588 C trans-Golgi network membrane
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043025 C neuronal cell body
GO:0044306 C neuron projection terminus
GO:0048280 P vesicle fusion with Golgi apparatus
GO:0048471 C perinuclear region of cytoplasm
GO:0050882 P voluntary musculoskeletal movement
GO:0090161 P Golgi ribbon formation
FPKM:21.88 TPM:16.78
4274 A_BomoASG_c15174_g1_i2
375bp
 vesicle_transport_through_interaction_with_t-SNAREs_homolog_1A_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005776 C autophagosome
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0006896 P Golgi to vacuole transport
GO:0006914 P autophagy
GO:0008021 C synaptic vesicle
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016192 P vesicle-mediated transport
GO:0030136 C clathrin-coated vesicle
GO:0031201 C SNARE complex
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0032588 C trans-Golgi network membrane
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043025 C neuronal cell body
GO:0044306 C neuron projection terminus
GO:0048280 P vesicle fusion with Golgi apparatus
GO:0048471 C perinuclear region of cytoplasm
GO:0050882 P voluntary musculoskeletal movement
GO:0090161 P Golgi ribbon formation
FPKM:2.75 TPM:2.11
4275 A_BomoASG_c15175_g1_i1
565bp
 gamma-glutamyltransferase_7-like_isoform_X1_[Bombyx_mori]
GO:0003840 F obsolete gamma-glutamyltransferase activity
GO:0005576 C extracellular region
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006749 P glutathione metabolic process
GO:0006751 P glutathione catabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016756 F glutathione gamma-glutamylcysteinyltransferase activity
GO:0016787 F hydrolase activity
GO:0034775 P glutathione transmembrane transport
GO:0036374 F glutathione hydrolase activity
GO:0048046 C apoplast
FPKM:4.74 TPM:3.63
4276 A_BomoASG_c15175_g1_i2
355bp
 gamma-glutamyltransferase_7-like_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003840 F obsolete gamma-glutamyltransferase activity
GO:0005575 C cellular_component
GO:0006508 P proteolysis
GO:0006749 P glutathione metabolic process
GO:0006750 P glutathione biosynthetic process
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016787 F hydrolase activity
GO:0036374 F glutathione hydrolase activity
FPKM:0.00 TPM:0.00
4277 A_BomoASG_c15176_g1_i1
264bp
FPKM:5.82 TPM:4.47
4278 A_BomoASG_c15177_g1_i1
290bp
FPKM:1.90 TPM:1.46
4279 A_BomoASG_c1517_g1_i1
433bp
 reverse_transcriptase,_partial_[Bombyx_mandarina]
FPKM:4.86 TPM:3.73
4280 A_BomoASG_c15180_g1_i1
299bp
FPKM:0.81 TPM:0.62
4281 A_BomoASG_c15181_g1_i1
513bp
FPKM:36.63 TPM:28.10
4282 A_BomoASG_c15182_g1_i1
489bp
FPKM:2.46 TPM:1.89
4283 A_BomoASG_c15183_g1_i1
213bp
FPKM:0.00 TPM:0.00
4284 A_BomoASG_c15184_g1_i1
201bp
FPKM:3.35 TPM:2.57
4285 A_BomoASG_c15185_g1_i1
214bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:7.34 TPM:5.63
4286 A_BomoASG_c15186_g1_i1
426bp
 LOW_QUALITY_PROTEIN:_obscurin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0012501 P programmed cell death
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046777 P protein autophosphorylation
GO:2000271 P positive regulation of fibroblast apoptotic process
FPKM:0.01 TPM:0.01
4287 A_BomoASG_c15186_g1_i2
680bp
 LOW_QUALITY_PROTEIN:_obscurin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0012501 P programmed cell death
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046777 P protein autophosphorylation
GO:2000271 P positive regulation of fibroblast apoptotic process
FPKM:1.12 TPM:0.86
4288 A_BomoASG_c15187_g1_i1
245bp
FPKM:0.63 TPM:0.49
4289 A_BomoASG_c15188_g1_i1
214bp
FPKM:5.50 TPM:4.22
4290 A_BomoASG_c15189_g1_i1
224bp
FPKM:1.61 TPM:1.23
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