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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3901 A_BomoASG_c14788_g1_i1
606bp
FPKM:2.87 TPM:2.20
3902 A_BomoASG_c14788_g2_i1
889bp
FPKM:1.61 TPM:1.23
3903 A_BomoASG_c14789_g1_i1
1895bp
 GPI_transamidase_component_PIG-T_[Bombyx_mori]
GO:0003923 F GPI-anchor transamidase activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016255 P attachment of GPI anchor to protein
GO:0030182 P neuron differentiation
GO:0042765 C GPI-anchor transamidase complex
GO:0051402 P neuron apoptotic process
FPKM:27.13 TPM:20.81
3904 A_BomoASG_c14790_g1_i1
361bp
 PREDICTED:_uncharacterized_protein_LOC108366379_[Rhagoletis_zephyria]
FPKM:1.42 TPM:1.09
3905 A_BomoASG_c14791_g1_i1
469bp
FPKM:4.12 TPM:3.16
3906 A_BomoASG_c14792_g1_i1
797bp
 low_molecular_30_kDa_lipoprotein_PBMHP-6_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005615 C extracellular space
FPKM:6.52 TPM:5.00
3907 A_BomoASG_c14793_g1_i1
308bp
 Uncharacterized_protein_OBRU01_10229,_partial_[Operophtera_brumata]
FPKM:1.91 TPM:1.46
3908 A_BomoASG_c14794_g1_i1
668bp
FPKM:1.72 TPM:1.32
3909 A_BomoASG_c14795_g1_i1
525bp
FPKM:5.56 TPM:4.27
3910 A_BomoASG_c14796_g1_i1
228bp
FPKM:4.59 TPM:3.52
3911 A_BomoASG_c14797_g1_i1
270bp
FPKM:5.03 TPM:3.86
3912 A_BomoASG_c14798_g1_i1
778bp
 cell_wall_protein_IFF6_[Bombyx_mori]
FPKM:75.47 TPM:57.89
3913 A_BomoASG_c14798_g2_i1
2036bp
 cell_wall_protein_IFF6_[Bombyx_mori]
FPKM:42.57 TPM:32.65
3914 A_BomoASG_c14798_g2_i2
1231bp
 cell_wall_protein_IFF6_[Bombyx_mori]
FPKM:2.44 TPM:1.87
3915 A_BomoASG_c147_g1_i1
1692bp
 eukaryotic_translation_initiation_factor_4A_isoform_X1_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000166 F nucleotide binding
GO:0000339 F RNA cap binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0002168 P instar larval development
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003729 F mRNA binding
GO:0003743 F translation initiation factor activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007279 P pole cell formation
GO:0007446 P imaginal disc growth
GO:0009950 P dorsal/ventral axis specification
GO:0010501 P RNA secondary structure unwinding
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0016787 F hydrolase activity
GO:0017116 F single-stranded DNA helicase activity
GO:0030718 P germ-line stem cell population maintenance
GO:0043186 C P granule
GO:0048132 P female germ-line stem cell asymmetric division
GO:0048477 P oogenesis
GO:0051297 P centrosome cycle
GO:0072686 C mitotic spindle
FPKM:606.72 TPM:465.38
3916 A_BomoASG_c14800_g1_i1
670bp
 protein_bric-a-brac_1_isoform_X1_[Bombyx_mori]
GO:0002118 P aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007417 P central nervous system development
GO:0007517 P muscle organ development
GO:0007530 P sex determination
GO:0007617 P mating behavior
GO:0007618 P mating
GO:0007620 P copulation
GO:0008049 P male courtship behavior
GO:0016199 P axon midline choice point recognition
GO:0016543 P male courtship behavior, orientation prior to leg tapping and wing vibration
GO:0016544 P male courtship behavior, tapping to detect pheromone
GO:0016545 P male courtship behavior, veined wing vibration
GO:0021954 P central nervous system neuron development
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0046661 P male sex differentiation
GO:0046872 F metal ion binding
GO:0048047 P mating behavior, sex discrimination
GO:0048065 P male courtship behavior, veined wing extension
GO:0048813 P dendrite morphogenesis
GO:0060179 P male mating behavior
FPKM:3.02 TPM:2.32
3917 A_BomoASG_c14800_g1_i2
1196bp
 protein_bric-a-brac_1_isoform_X1_[Bombyx_mori]
GO:0002118 P aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007417 P central nervous system development
GO:0007517 P muscle organ development
GO:0007530 P sex determination
GO:0007617 P mating behavior
GO:0007618 P mating
GO:0007620 P copulation
GO:0008049 P male courtship behavior
GO:0016199 P axon midline choice point recognition
GO:0016543 P male courtship behavior, orientation prior to leg tapping and wing vibration
GO:0016544 P male courtship behavior, tapping to detect pheromone
GO:0016545 P male courtship behavior, veined wing vibration
GO:0021954 P central nervous system neuron development
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0046661 P male sex differentiation
GO:0046872 F metal ion binding
GO:0048047 P mating behavior, sex discrimination
GO:0048065 P male courtship behavior, veined wing extension
GO:0048813 P dendrite morphogenesis
GO:0060179 P male mating behavior
FPKM:26.60 TPM:20.41
3918 A_BomoASG_c14801_g1_i1
953bp
 translocator_protein_[Bombyx_mori]
GO:0005497 F androgen binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006626 P protein targeting to mitochondrion
GO:0006694 P steroid biosynthetic process
GO:0006783 P heme biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006820 P anion transport
GO:0006821 P chloride transport
GO:0006869 P lipid transport
GO:0006915 P apoptotic process
GO:0007268 P chemical synaptic transmission
GO:0007568 P aging
GO:0008202 P steroid metabolic process
GO:0008283 P cell population proliferation
GO:0008347 P glial cell migration
GO:0008503 F benzodiazepine receptor activity
GO:0010042 P response to manganese ion
GO:0010266 P response to vitamin B1
GO:0010823 P negative regulation of mitochondrion organization
GO:0010940 P positive regulation of necrotic cell death
GO:0014012 P peripheral nervous system axon regeneration
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030325 P adrenal gland development
GO:0031397 P negative regulation of protein ubiquitination
GO:0031965 C nuclear membrane
GO:0031966 C mitochondrial membrane
GO:0032374 P regulation of cholesterol transport
GO:0032570 P response to progesterone
GO:0032720 P negative regulation of tumor necrosis factor production
GO:0033574 P response to testosterone
GO:0042493 P response to xenobiotic stimulus
GO:0043065 P positive regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0044325 F transmembrane transporter binding
GO:0045019 P negative regulation of nitric oxide biosynthetic process
GO:0048265 P response to pain
GO:0048266 P behavioral response to pain
GO:0048678 P response to axon injury
GO:0050810 P regulation of steroid biosynthetic process
GO:0051901 P positive regulation of mitochondrial depolarization
GO:0051928 P positive regulation of calcium ion transport
GO:0060242 P contact inhibition
GO:0060252 P positive regulation of glial cell proliferation
GO:0060253 P negative regulation of glial cell proliferation
GO:0070062 C extracellular exosome
GO:0071222 P cellular response to lipopolysaccharide
GO:0071294 P cellular response to zinc ion
GO:0071476 P cellular hypotonic response
GO:0072655 P establishment of protein localization to mitochondrion
GO:0072656 P maintenance of protein location in mitochondrion
GO:0098794 C postsynapse
GO:0099565 P chemical synaptic transmission, postsynaptic
GO:1903147 P negative regulation of autophagy of mitochondrion
GO:1903579 P negative regulation of ATP metabolic process
GO:2000379 P positive regulation of reactive oxygen species metabolic process
FPKM:14.33 TPM:10.99
3919 A_BomoASG_c14803_g1_i1
652bp
 LOW_QUALITY_PROTEIN:_fat-like_cadherin-related_tumor_suppressor_homolog,_partial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007293 P germarium-derived egg chamber formation
GO:0007295 P growth of a germarium-derived egg chamber
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0030950 P establishment or maintenance of actin cytoskeleton polarity
GO:0042247 P establishment of planar polarity of follicular epithelium
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045089 P positive regulation of innate immune response
GO:0045571 P negative regulation of imaginal disc growth
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050839 F cell adhesion molecule binding
GO:0060429 P epithelium development
FPKM:2.01 TPM:1.54
3920 A_BomoASG_c14805_g1_i1
432bp
 phospholipase_C_gamma_isoform_X1_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0001726 C ruffle
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0004435 F phosphatidylinositol phospholipase C activity
GO:0004871 F obsolete signal transducer activity
GO:0005168 F neurotrophin TRKA receptor binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006629 P lipid metabolic process
GO:0007165 P signal transduction
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008081 F phosphoric diester hydrolase activity
GO:0008180 C COP9 signalosome
GO:0009395 P phospholipid catabolic process
GO:0010634 P positive regulation of epithelial cell migration
GO:0016042 P lipid catabolic process
GO:0016477 P cell migration
GO:0016787 F hydrolase activity
GO:0019722 P calcium-mediated signaling
GO:0019901 F protein kinase binding
GO:0030027 C lamellipodium
GO:0030971 F receptor tyrosine kinase binding
GO:0035254 F glutamate receptor binding
GO:0035556 P intracellular signal transduction
GO:0042995 C cell projection
GO:0043536 P positive regulation of blood vessel endothelial cell migration
GO:0045766 P positive regulation of angiogenesis
GO:0046872 F metal ion binding
GO:0050852 P T cell receptor signaling pathway
GO:0051281 P positive regulation of release of sequestered calcium ion into cytosol
GO:0071364 P cellular response to epidermal growth factor stimulus
FPKM:2.54 TPM:1.95
3921 A_BomoASG_c14806_g1_i1
356bp
 protein_deltex_[Bombyx_mori]
GO:0005112 F Notch binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006897 P endocytosis
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0008270 F zinc ion binding
GO:0008593 P regulation of Notch signaling pathway
GO:0016055 P Wnt signaling pathway
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0017124 F SH3 domain binding
GO:0035220 P wing disc development
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
FPKM:6.41 TPM:4.92
3922 A_BomoASG_c14807_g1_i1
405bp
FPKM:3.76 TPM:2.88
3923 A_BomoASG_c14808_g1_i1
547bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
FPKM:1.65 TPM:1.27
3924 A_BomoASG_c14809_g1_i1
286bp
FPKM:2.22 TPM:1.70
3925 A_BomoASG_c14810_g1_i1
771bp
 RNA_helicase_Mov10l1_isoform_X2_[Bombyx_mori]
FPKM:4.02 TPM:3.08
3926 A_BomoASG_c14811_g1_i1
238bp
FPKM:2.05 TPM:1.57
3927 A_BomoASG_c14812_g1_i1
706bp
FPKM:9.19 TPM:7.05
3928 A_BomoASG_c14813_g1_i1
615bp
 uncharacterized_protein_LOC110386518_[Bombyx_mori]
FPKM:1.15 TPM:0.88
3929 A_BomoASG_c14813_g1_i2
298bp
 uncharacterized_protein_LOC110386518_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3930 A_BomoASG_c14813_g1_i3
231bp
 uncharacterized_protein_LOC110386518_[Bombyx_mori]
FPKM:0.00 TPM:0.00
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