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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3691 A_BomoASG_c14574_g1_i1
234bp
FPKM:12.12 TPM:9.29
3692 A_BomoASG_c14575_g1_i1
441bp
FPKM:2.05 TPM:1.58
3693 A_BomoASG_c14577_g1_i1
617bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_KIAA1109_[Bombyx_mori]
GO:0001558 P regulation of cell growth
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006629 P lipid metabolic process
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019915 P lipid storage
GO:0045444 P fat cell differentiation
GO:0051647 P nucleus localization
GO:0060612 P adipose tissue development
FPKM:2.55 TPM:1.95
3694 A_BomoASG_c14578_g1_i1
265bp
 PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
FPKM:2.62 TPM:2.01
3695 A_BomoASG_c14579_g1_i1
468bp
FPKM:31.73 TPM:24.34
3696 A_BomoASG_c14581_g1_i1
320bp
FPKM:4.25 TPM:3.26
3697 A_BomoASG_c14582_g1_i1
243bp
FPKM:3.23 TPM:2.48
3698 A_BomoASG_c14583_g1_i1
233bp
FPKM:0.00 TPM:0.00
3699 A_BomoASG_c14584_g1_i1
595bp
 evolutionarily_conserved_signaling_intermediate_in_Toll_pathway,_mitochondrial_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006952 P defense response
GO:0007165 P signal transduction
GO:0008063 P Toll signaling pathway
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0045087 P innate immune response
GO:0051341 P regulation of oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:4.28 TPM:3.28
3700 A_BomoASG_c14585_g1_i1
677bp
 uncharacterized_protein_LOC105842363_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
FPKM:3.05 TPM:2.34
3701 A_BomoASG_c14586_g1_i1
236bp
FPKM:6.97 TPM:5.35
3702 A_BomoASG_c14587_g1_i1
537bp
FPKM:2.62 TPM:2.01
3703 A_BomoASG_c14588_g1_i1
392bp
 breast_cancer_type_2_susceptibility_protein_[Helicoverpa_armigera]
FPKM:0.00 TPM:0.00
3704 A_BomoASG_c14588_g1_i2
906bp
 uncharacterized_protein_LOC105842293_[Bombyx_mori]
FPKM:1.81 TPM:1.38
3705 A_BomoASG_c14589_g1_i1
220bp
 protein_disabled_[Bombyx_mori]
GO:0005118 F sevenless binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007391 P dorsal closure
GO:0007399 P nervous system development
GO:0008045 P motor neuron axon guidance
GO:0017124 F SH3 domain binding
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0032502 P developmental process
GO:0042051 P compound eye photoreceptor development
GO:0042169 F SH2 domain binding
GO:0045500 P sevenless signaling pathway
GO:0048488 P synaptic vesicle endocytosis
GO:0072583 P clathrin-dependent endocytosis
FPKM:0.85 TPM:0.65
3706 A_BomoASG_c14589_g1_i2
272bp
 protein_disabled_[Bombyx_mori]
GO:0005118 F sevenless binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007391 P dorsal closure
GO:0007399 P nervous system development
GO:0008045 P motor neuron axon guidance
GO:0017124 F SH3 domain binding
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0032502 P developmental process
GO:0042051 P compound eye photoreceptor development
GO:0042169 F SH2 domain binding
GO:0045500 P sevenless signaling pathway
GO:0048488 P synaptic vesicle endocytosis
GO:0072583 P clathrin-dependent endocytosis
FPKM:0.99 TPM:0.76
3707 A_BomoASG_c14590_g1_i1
409bp
FPKM:0.92 TPM:0.71
3708 A_BomoASG_c14590_g2_i1
440bp
FPKM:3.09 TPM:2.37
3709 A_BomoASG_c14591_g1_i1
599bp
 disks_large-associated_protein_5_isoform_X3_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005876 C spindle microtubule
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0007052 P mitotic spindle organization
GO:0007059 P chromosome segregation
GO:0007346 P regulation of mitotic cell cycle
GO:0008017 F microtubule binding
GO:0008157 F protein phosphatase 1 binding
GO:0016020 C membrane
GO:0023052 P signaling
GO:0051382 P kinetochore assembly
GO:0051642 P centrosome localization
GO:0051726 P regulation of cell cycle
GO:0072686 C mitotic spindle
FPKM:2.12 TPM:1.63
3710 A_BomoASG_c14593_g1_i1
349bp
FPKM:0.91 TPM:0.69
3711 A_BomoASG_c14593_g2_i1
317bp
FPKM:2.52 TPM:1.94
3712 A_BomoASG_c14594_g1_i1
586bp
 vitellogenin_receptor_precursor_[Bombyx_mori]
GO:0003279 P cardiac septum development
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005905 C clathrin-coated pit
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007275 P multicellular organism development
GO:0008203 P cholesterol metabolic process
GO:0010875 P positive regulation of cholesterol efflux
GO:0014912 P negative regulation of smooth muscle cell migration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0032370 P positive regulation of lipid transport
GO:0032374 P regulation of cholesterol transport
GO:0032403 F protein-containing complex binding
GO:0032429 P regulation of phospholipase A2 activity
GO:0032956 P regulation of actin cytoskeleton organization
GO:0034185 F apolipoprotein binding
GO:0035909 P aorta morphogenesis
GO:0043235 C receptor complex
GO:0043277 P apoptotic cell clearance
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0060976 P coronary vasculature development
GO:0097242 P amyloid-beta clearance
GO:2000587 P negative regulation of platelet-derived growth factor receptor-beta signaling pathway
FPKM:3.55 TPM:2.72
3713 A_BomoASG_c14595_g1_i1
211bp
FPKM:10.53 TPM:8.08
3714 A_BomoASG_c14596_g1_i1
455bp
FPKM:1.37 TPM:1.05
3715 A_BomoASG_c14597_g1_i1
360bp
FPKM:3.14 TPM:2.41
3716 A_BomoASG_c14598_g1_i1
251bp
FPKM:2.39 TPM:1.83
3717 A_BomoASG_c14599_g1_i1
529bp
 ATP-dependent_RNA_helicase_DDX18_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008283 P cell population proliferation
GO:0010501 P RNA secondary structure unwinding
GO:0016049 P cell growth
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
FPKM:3.15 TPM:2.41
3718 A_BomoASG_c1459_g1_i1
392bp
FPKM:2.23 TPM:1.71
3719 A_BomoASG_c145_g1_i1
1274bp
 nucleoplasmin_isoform_2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006338 P chromatin remodeling
GO:0016584 P nucleosome positioning
GO:0035041 P sperm DNA decondensation
GO:0042393 F histone binding
GO:0042623 F ATP hydrolysis activity
FPKM:87.71 TPM:67.28
3720 A_BomoASG_c145_g1_i2
1226bp
 nucleoplasmin_isoform_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006338 P chromatin remodeling
GO:0016584 P nucleosome positioning
GO:0035041 P sperm DNA decondensation
GO:0042393 F histone binding
GO:0042623 F ATP hydrolysis activity
FPKM:170.68 TPM:130.92
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