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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3661 A_BomoASG_c14541_g1_i1
264bp
FPKM:0.00 TPM:0.00
3662 A_BomoASG_c14541_g1_i2
519bp
 Uncharacterized_protein_OBRU01_24343_[Operophtera_brumata]
FPKM:4.20 TPM:3.22
3663 A_BomoASG_c14542_g1_i1
728bp
 sodium/hydrogen_exchanger_9B2_isoform_X5_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006814 P sodium ion transport
GO:0015297 F antiporter activity
GO:0015299 F solute:proton antiporter activity
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0055085 P transmembrane transport
GO:1902600 P proton transmembrane transport
GO:2001206 P positive regulation of osteoclast development
FPKM:2.06 TPM:1.58
3664 A_BomoASG_c14544_g1_i1
332bp
 Mariner_Mos1_transposase_[Acromyrmex_echinatior]
FPKM:1.65 TPM:1.27
3665 A_BomoASG_c14545_g1_i1
263bp
 uncharacterized_protein_LOC110385830_[Bombyx_mori]
FPKM:1.60 TPM:1.23
3666 A_BomoASG_c14547_g1_i1
230bp
FPKM:2.24 TPM:1.72
3667 A_BomoASG_c14548_g1_i1
725bp
FPKM:2.07 TPM:1.59
3668 A_BomoASG_c14549_g1_i1
758bp
 peroxisomal_acyl-coenzyme_A_oxidase_3_[Bombyx_mori]
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:6.45 TPM:4.95
3669 A_BomoASG_c14551_g1_i1
215bp
FPKM:4.52 TPM:3.47
3670 A_BomoASG_c14553_g1_i1
436bp
FPKM:1.25 TPM:0.96
3671 A_BomoASG_c14555_g1_i1
808bp
 60S_ribosome_subunit_biogenesis_protein_NIP7_homolog_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0042254 P ribosome biogenesis
GO:0042255 P ribosome assembly
FPKM:2.06 TPM:1.58
3672 A_BomoASG_c14555_g1_i2
689bp
 60S_ribosome_subunit_biogenesis_protein_NIP7_homolog_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0042254 P ribosome biogenesis
GO:0042255 P ribosome assembly
FPKM:17.55 TPM:13.46
3673 A_BomoASG_c14556_g1_i1
290bp
FPKM:1.29 TPM:0.99
3674 A_BomoASG_c14557_g1_i1
387bp
 uncharacterized_protein_LOC101736090_isoform_X4_[Bombyx_mori]
FPKM:5.31 TPM:4.07
3675 A_BomoASG_c14559_g1_i1
252bp
 Uncharacterized_protein_OBRU01_23344_[Operophtera_brumata]
FPKM:1.18 TPM:0.91
3676 A_BomoASG_c14561_g1_i1
335bp
FPKM:2.93 TPM:2.24
3677 A_BomoASG_c14562_g1_i1
398bp
FPKM:1.69 TPM:1.30
3678 A_BomoASG_c14563_g1_i1
370bp
 C-1-tetrahydrofolate_synthase,_cytoplasmic_isoform_X1_[Bombyx_mori]
GO:0000105 P histidine biosynthetic process
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004329 F formate-tetrahydrofolate ligase activity
GO:0004477 F methenyltetrahydrofolate cyclohydrolase activity
GO:0004488 F methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006164 P purine nucleotide biosynthetic process
GO:0006730 P one-carbon metabolic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0009396 P folic acid-containing compound biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0016787 F hydrolase activity
GO:0016874 F ligase activity
GO:0035999 P tetrahydrofolate interconversion
GO:0055114 P obsolete oxidation-reduction process
FPKM:5.45 TPM:4.18
3679 A_BomoASG_c14564_g1_i1
318bp
 uncharacterized_protein_LOC105842632_[Bombyx_mori]
FPKM:0.72 TPM:0.55
3680 A_BomoASG_c14564_g1_i2
202bp
FPKM:2.20 TPM:1.69
3681 A_BomoASG_c14565_g1_i1
271bp
FPKM:3.49 TPM:2.68
3682 A_BomoASG_c14566_g1_i1
574bp
FPKM:2.67 TPM:2.05
3683 A_BomoASG_c14568_g1_i1
291bp
FPKM:2.99 TPM:2.30
3684 A_BomoASG_c14569_g1_i1
454bp
 collagen,_type_IV_[Bombyx_mori]
GO:0001501 P skeletal system development
GO:0001894 P tissue homeostasis
GO:0002062 P chondrocyte differentiation
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0007605 P sensory perception of sound
GO:0030199 P collagen fibril organization
GO:0046872 F metal ion binding
GO:0048705 P skeletal system morphogenesis
GO:0051216 P cartilage development
GO:0060021 P roof of mouth development
GO:0060023 P soft palate development
FPKM:1.51 TPM:1.16
3685 A_BomoASG_c14569_g1_i2
328bp
 collagen,_type_IV_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005594 C collagen type IX trimer
GO:0005788 C endoplasmic reticulum lumen
GO:0008584 P male gonad development
GO:0008585 P female gonad development
GO:0030020 F extracellular matrix structural constituent conferring tensile strength
GO:0030198 P extracellular matrix organization
FPKM:0.45 TPM:0.34
3686 A_BomoASG_c14570_g1_i1
435bp
 PREDICTED:_uncharacterized_protein_LOC106129228_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.68 TPM:1.29
3687 A_BomoASG_c14570_g1_i2
370bp
 gustatory_receptor_2,_partial_[Athetis_dissimilis]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.00 TPM:0.00
3688 A_BomoASG_c14571_g1_i1
409bp
 putative_fatty_acyl-CoA_reductase_CG5065_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0008611 P ether lipid biosynthetic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
FPKM:0.00 TPM:0.00
3689 A_BomoASG_c14571_g1_i2
551bp
 putative_fatty_acyl-CoA_reductase_CG5065_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0008611 P ether lipid biosynthetic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
FPKM:7.28 TPM:5.58
3690 A_BomoASG_c14573_g1_i1
386bp
 LOW_QUALITY_PROTEIN:_mediator_of_RNA_polymerase_II_transcription_subunit_14_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:8.89 TPM:6.82
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