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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2491 A_BomoASG_c1324_g1_i1
306bp
FPKM:4.25 TPM:3.26
2492 A_BomoASG_c13251_g1_i1
3358bp
 serine/threonine-protein_kinase_OSR1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001933 P negative regulation of protein phosphorylation
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0008217 P regulation of blood pressure
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0019901 F protein kinase binding
GO:0023014 P signal transduction
GO:0035556 P intracellular signal transduction
GO:0043268 P positive regulation of potassium ion transport
GO:0050727 P regulation of inflammatory response
GO:0071476 P cellular hypotonic response
GO:0090188 P negative regulation of pancreatic juice secretion
GO:1901017 P negative regulation of potassium ion transmembrane transporter activity
GO:1901380 P negative regulation of potassium ion transmembrane transport
GO:2000021 P ion homeostasis
GO:2000681 P obsolete negative regulation of rubidium ion transport
GO:2000687 P obsolete negative regulation of rubidium ion transmembrane transporter activity
FPKM:13.21 TPM:10.13
2493 A_BomoASG_c13251_g1_i2
3314bp
 serine/threonine-protein_kinase_OSR1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001933 P negative regulation of protein phosphorylation
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0008217 P regulation of blood pressure
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0019901 F protein kinase binding
GO:0023014 P signal transduction
GO:0035556 P intracellular signal transduction
GO:0043268 P positive regulation of potassium ion transport
GO:0050727 P regulation of inflammatory response
GO:0071476 P cellular hypotonic response
GO:0090188 P negative regulation of pancreatic juice secretion
GO:1901017 P negative regulation of potassium ion transmembrane transporter activity
GO:1901380 P negative regulation of potassium ion transmembrane transport
GO:2000021 P ion homeostasis
GO:2000681 P obsolete negative regulation of rubidium ion transport
GO:2000687 P obsolete negative regulation of rubidium ion transmembrane transporter activity
FPKM:25.97 TPM:19.92
2494 A_BomoASG_c13252_g1_i1
1832bp
 seminal_fluid_protein_[Nilaparvata_lugens]
GO:0005509 F calcium ion binding
GO:0046872 F metal ion binding
FPKM:417.61 TPM:320.33
2495 A_BomoASG_c13253_g1_i1
528bp
FPKM:1.42 TPM:1.09
2496 A_BomoASG_c13254_g1_i1
823bp
 uncharacterized_protein_LOC101746454_[Bombyx_mori]
FPKM:19.23 TPM:14.75
2497 A_BomoASG_c13255_g1_i1
307bp
FPKM:1.92 TPM:1.47
2498 A_BomoASG_c13256_g1_i1
288bp
FPKM:1.31 TPM:1.01
2499 A_BomoASG_c13257_g1_i1
516bp
 NADH_dehydrogenase_subunit_4_(mitochondrion)_[Bombyx_mandarina]
GO:0005739 C mitochondrion
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0031966 C mitochondrial membrane
GO:0042773 P ATP synthesis coupled electron transport
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:125.42 TPM:96.20
2500 A_BomoASG_c13257_g2_i1
465bp
 NADH_dehydrogenase_subunit_4_(mitochondrion)_[Rondotia_menciana]
GO:0005739 C mitochondrion
GO:0006120 P mitochondrial electron transport, NADH to ubiquinone
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0031966 C mitochondrial membrane
GO:0042773 P ATP synthesis coupled electron transport
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:52.89 TPM:40.57
2501 A_BomoASG_c13259_g1_i1
642bp
FPKM:3.75 TPM:2.87
2502 A_BomoASG_c13261_g1_i1
353bp
FPKM:1.48 TPM:1.13
2503 A_BomoASG_c13262_g1_i1
3489bp
 hepatocyte_growth_factor-regulated_tyrosine_kinase_substrate_isoform_X1_[Bombyx_mori]
GO:0001933 P negative regulation of protein phosphorylation
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006897 P endocytosis
GO:0007269 P neurotransmitter secretion
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0008021 C synaptic vesicle
GO:0008293 P torso signaling pathway
GO:0008333 P endosome to lysosome transport
GO:0008593 P regulation of Notch signaling pathway
GO:0016050 P vesicle organization
GO:0016079 P synaptic vesicle exocytosis
GO:0016082 P synaptic vesicle priming
GO:0016197 P endosomal transport
GO:0016322 P neuron remodeling
GO:0031398 P positive regulation of protein ubiquitination
GO:0032509 P endosome transport via multivesicular body sorting pathway
GO:0033565 C ESCRT-0 complex
GO:0033619 P membrane protein proteolysis
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0043130 F ubiquitin binding
GO:0045743 P positive regulation of fibroblast growth factor receptor signaling pathway
GO:0045752 P positive regulation of Toll signaling pathway
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051726 P regulation of cell cycle
GO:1990182 P exosomal secretion
GO:2000274 P regulation of epithelial cell migration, open tracheal system
FPKM:46.33 TPM:35.54
2504 A_BomoASG_c13263_g1_i1
228bp
 uncharacterized_protein_LOC105842437_[Bombyx_mori]
FPKM:2.29 TPM:1.76
2505 A_BomoASG_c13264_g1_i1
234bp
FPKM:0.00 TPM:0.00
2506 A_BomoASG_c13265_g1_i1
2652bp
 transcription_elongation_factor_B_polypeptide_1_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0030891 C VCB complex
GO:0032403 F protein-containing complex binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0070449 C elongin complex
FPKM:38.75 TPM:29.72
2507 A_BomoASG_c13266_g1_i1
273bp
FPKM:11.77 TPM:9.03
2508 A_BomoASG_c13267_g1_i1
371bp
FPKM:5.97 TPM:4.58
2509 A_BomoASG_c13268_g1_i1
316bp
FPKM:5.44 TPM:4.17
2510 A_BomoASG_c13269_g1_i1
397bp
FPKM:1.94 TPM:1.49
2511 A_BomoASG_c13270_g1_i1
630bp
 succinate_dehydrogenase_cytochrome_b560_subunit,_mitochondrial_[Bombyx_mori]
GO:0000104 F succinate dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005749 C mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
GO:0006099 P tricarboxylic acid cycle
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0020037 F heme binding
GO:0045281 C succinate dehydrogenase complex
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:98.63 TPM:75.65
2512 A_BomoASG_c13270_g1_i2
719bp
 succinate_dehydrogenase_cytochrome_b560_subunit,_mitochondrial_[Bombyx_mori]
GO:0000104 F succinate dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005749 C mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
GO:0006099 P tricarboxylic acid cycle
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0020037 F heme binding
GO:0045281 C succinate dehydrogenase complex
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:12.27 TPM:9.41
2513 A_BomoASG_c13271_g1_i1
277bp
FPKM:1.43 TPM:1.09
2514 A_BomoASG_c13272_g1_i1
300bp
 uncharacterized_protein_LOC110385830_[Bombyx_mori]
FPKM:2.81 TPM:2.16
2515 A_BomoASG_c13273_g1_i1
404bp
FPKM:2.12 TPM:1.63
2516 A_BomoASG_c13275_g1_i1
246bp
FPKM:0.00 TPM:0.00
2517 A_BomoASG_c13275_g1_i2
314bp
FPKM:0.73 TPM:0.56
2518 A_BomoASG_c13276_g1_i1
321bp
FPKM:3.87 TPM:2.97
2519 A_BomoASG_c13277_g1_i1
4094bp
 alpha-protein_kinase_1_[Bombyx_mori]
FPKM:28.81 TPM:22.10
2520 A_BomoASG_c13278_g1_i1
1591bp
 phosphoglycerate_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004618 F phosphoglycerate kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006096 P glycolytic process
GO:0007268 P chemical synaptic transmission
GO:0007520 P myoblast fusion
GO:0007525 P somatic muscle development
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030018 C Z disc
GO:0031430 C M band
GO:0046716 P muscle cell cellular homeostasis
FPKM:168.09 TPM:128.93
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