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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2041 A_BomoASG_c12780_g1_i1
810bp
FPKM:44.44 TPM:34.09
2042 A_BomoASG_c12783_g1_i1
262bp
FPKM:2.32 TPM:1.78
2043 A_BomoASG_c12783_g1_i2
357bp
FPKM:1.07 TPM:0.82
2044 A_BomoASG_c12784_g1_i1
258bp
 WD_repeat-containing_protein_6_[Danaus_plexippus_plexippus]
FPKM:5.02 TPM:3.85
2045 A_BomoASG_c12785_g1_i1
588bp
FPKM:2.72 TPM:2.09
2046 A_BomoASG_c12786_g1_i1
343bp
FPKM:2.49 TPM:1.91
2047 A_BomoASG_c12787_g1_i1
238bp
 uncharacterized_protein_LOC101741015_[Bombyx_mori]
FPKM:2.05 TPM:1.57
2048 A_BomoASG_c12788_g1_i1
311bp
FPKM:2.26 TPM:1.74
2049 A_BomoASG_c12788_g1_i2
743bp
FPKM:5.51 TPM:4.22
2050 A_BomoASG_c12789_g1_i1
919bp
 juvenile_hormone_esterase_binding_protein_[Bombyx_mori]
GO:0005739 C mitochondrion
FPKM:20.37 TPM:15.62
2051 A_BomoASG_c12790_g1_i1
497bp
 peroxisomal_membrane_protein_11B_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0007031 P peroxisome organization
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016559 P peroxisome fission
GO:0042803 F protein homodimerization activity
GO:0043234 C protein-containing complex
GO:0044375 P regulation of peroxisome size
GO:0051260 P protein homooligomerization
GO:0070062 C extracellular exosome
FPKM:2.37 TPM:1.82
2052 A_BomoASG_c12790_g1_i2
655bp
 peroxisomal_membrane_protein_11B_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0007031 P peroxisome organization
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016559 P peroxisome fission
GO:0042803 F protein homodimerization activity
GO:0043234 C protein-containing complex
GO:0044375 P regulation of peroxisome size
GO:0051260 P protein homooligomerization
GO:0070062 C extracellular exosome
FPKM:14.01 TPM:10.74
2053 A_BomoASG_c12790_g1_i3
287bp
FPKM:10.24 TPM:7.86
2054 A_BomoASG_c12791_g1_i1
696bp
 centrosomal_protein_of_164_kDa_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0030030 P cell projection organization
GO:0042384 P cilium assembly
GO:0051301 P cell division
GO:0097539 C ciliary transition fiber
FPKM:2.29 TPM:1.75
2055 A_BomoASG_c12793_g1_i1
1061bp
 transcription_initiation_factor_TFIID_subunit_8_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0009987 P cellular process
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
FPKM:14.76 TPM:11.32
2056 A_BomoASG_c12793_g1_i2
888bp
 transcription_initiation_factor_TFIID_subunit_8_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0009987 P cellular process
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
FPKM:4.28 TPM:3.28
2057 A_BomoASG_c12794_g1_i1
231bp
FPKM:0.74 TPM:0.57
2058 A_BomoASG_c12795_g1_i1
846bp
FPKM:1.96 TPM:1.50
2059 A_BomoASG_c12797_g1_i1
1867bp
 uncharacterized_protein_LOC101738661_[Bombyx_mori]
GO:0001889 P liver development
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006614 P SRP-dependent cotranslational protein targeting to membrane
GO:0006620 P posttranslational protein targeting to endoplasmic reticulum membrane
GO:0006807 P nitrogen compound metabolic process
GO:0006810 P transport
GO:0010259 P multicellular organism aging
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0044822 F RNA binding
GO:0072001 P renal system development
FPKM:40.92 TPM:31.39
2060 A_BomoASG_c12798_g1_i1
476bp
FPKM:2.38 TPM:1.83
2061 A_BomoASG_c127_g1_i1
368bp
FPKM:1.65 TPM:1.27
2062 A_BomoASG_c12800_g1_i1
1103bp
FPKM:56.95 TPM:43.68
2063 A_BomoASG_c12801_g1_i1
3833bp
 adenomatous_polyposis_coli_protein_isoform_X2_[Bombyx_mori]
FPKM:49.48 TPM:37.95
2064 A_BomoASG_c12802_g1_i1
431bp
FPKM:8.94 TPM:6.85
2065 A_BomoASG_c12804_g1_i1
661bp
 iron-sulfur_cluster_assembly_1_homolog,_mitochondrial_[Bombyx_mori]
GO:0005198 F structural molecule activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006790 P sulfur compound metabolic process
GO:0008198 F ferrous iron binding
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071000 P response to magnetism
GO:0097428 P protein maturation by iron-sulfur cluster transfer
FPKM:23.86 TPM:18.30
2066 A_BomoASG_c12805_g1_i1
265bp
FPKM:6.82 TPM:5.23
2067 A_BomoASG_c12806_g1_i1
210bp
 leucine-rich_repeat_neuronal_protein_3_isoform_X2_[Bombyx_mori]
FPKM:1.94 TPM:1.49
2068 A_BomoASG_c12807_g1_i1
1492bp
 tak1_isoform_X1_[Bombyx_mori]
GO:0000185 P obsolete activation of MAPKKK activity
GO:0001701 P in utero embryonic development
GO:0003007 P heart morphogenesis
GO:0003279 P cardiac septum development
GO:0003824 F catalytic activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0019209 F kinase activator activity
GO:0030324 P lung development
GO:0035904 P aorta development
GO:0060976 P coronary vasculature development
FPKM:15.59 TPM:11.96
2069 A_BomoASG_c12809_g1_i1
1721bp
 Golgi_reassembly-stacking_protein_2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0006996 P organelle organization
GO:0016020 C membrane
FPKM:63.91 TPM:49.02
2070 A_BomoASG_c1280_g1_i1
297bp
FPKM:1.23 TPM:0.94
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