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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1261 A_BomoASG_c11893_g1_i1
216bp
FPKM:1.78 TPM:1.37
1262 A_BomoASG_c11894_g1_i1
278bp
 PREDICTED:_MAGUK_p55_subfamily_member_7_isoform_X1_[Amyelois_transitella]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0043231 C intracellular membrane-bounded organelle
FPKM:3.30 TPM:2.53
1263 A_BomoASG_c11896_g1_i1
262bp
 protein_unc-80_homolog_[Bombyx_mori]
GO:0005261 F cation channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034703 C cation channel complex
GO:0045475 P locomotor rhythm
GO:0055080 P cation homeostasis
GO:0098655 P cation transmembrane transport
FPKM:1.03 TPM:0.79
1264 A_BomoASG_c11896_g1_i2
548bp
 protein_unc-80_homolog_[Bombyx_mori]
GO:0005261 F cation channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034703 C cation channel complex
GO:0045475 P locomotor rhythm
GO:0055080 P cation homeostasis
GO:0098655 P cation transmembrane transport
FPKM:2.11 TPM:1.62
1265 A_BomoASG_c11898_g1_i1
259bp
FPKM:2.21 TPM:1.70
1266 A_BomoASG_c11899_g1_i1
324bp
 PREDICTED:_synaptic_vesicle_2-related_protein-like_[Plutella_xylostella]
GO:0006810 P transport
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
FPKM:2.42 TPM:1.86
1267 A_BomoASG_c1189_g1_i1
563bp
 protein_strawberry_notch_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007219 P Notch signaling pathway
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048190 P wing disc dorsal/ventral pattern formation
FPKM:2.31 TPM:1.77
1268 A_BomoASG_c118_g1_i1
235bp
 uncharacterized_protein_LOC101739606_[Bombyx_mori]
FPKM:1.41 TPM:1.08
1269 A_BomoASG_c11900_g1_i1
293bp
 arf-GAP_with_Rho-GAP_domain,_ANK_repeat_and_PH_domain-containing_protein_2_isoform_X1_[Bombyx_mori]
FPKM:3.20 TPM:2.46
1270 A_BomoASG_c11901_g1_i1
231bp
 uncharacterized_LOC101743290_precursor_[Bombyx_mori]
FPKM:2.95 TPM:2.26
1271 A_BomoASG_c11902_g1_i1
491bp
 uncharacterized_protein_LOC101744306_isoform_X6_[Bombyx_mori]
GO:0000972 P transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0031081 P nuclear pore localization
GO:0031965 C nuclear membrane
GO:0043130 F ubiquitin binding
GO:0051028 P mRNA transport
GO:2000728 P regulation of mRNA export from nucleus in response to heat stress
FPKM:1.22 TPM:0.94
1272 A_BomoASG_c11904_g1_i1
252bp
FPKM:6.50 TPM:4.98
1273 A_BomoASG_c11905_g1_i1
605bp
 ribosome-releasing_factor_2,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0032543 P mitochondrial translation
GO:0032790 P ribosome disassembly
FPKM:4.05 TPM:3.11
1274 A_BomoASG_c11906_g1_i1
213bp
FPKM:9.30 TPM:7.13
1275 A_BomoASG_c11907_g1_i1
360bp
 odorant-binding_protein_7_precursor_[Bombyx_mori]
GO:0005549 F odorant binding
GO:0005550 F pheromone binding
GO:0005576 C extracellular region
GO:0007606 P sensory perception of chemical stimulus
GO:0008145 F phenylalkylamine binding
FPKM:2.00 TPM:1.53
1276 A_BomoASG_c11909_g1_i1
202bp
FPKM:3.30 TPM:2.53
1277 A_BomoASG_c11910_g1_i1
241bp
 hypothetical_protein_KGM_202838_[Danaus_plexippus_plexippus]
FPKM:5.28 TPM:4.05
1278 A_BomoASG_c11912_g1_i1
375bp
 uncharacterized_LOC101743290_precursor_[Bombyx_mori]
FPKM:2.13 TPM:1.64
1279 A_BomoASG_c11913_g1_i1
262bp
FPKM:2.15 TPM:1.65
1280 A_BomoASG_c11916_g1_i1
344bp
 LOW_QUALITY_PROTEIN:_ionotropic_receptor_21a,_partial_[Bombyx_mori]
FPKM:1.55 TPM:1.19
1281 A_BomoASG_c11917_g1_i1
337bp
FPKM:1.29 TPM:0.99
1282 A_BomoASG_c11918_g1_i1
592bp
 hypothetical_protein,_partial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001172 P transcription, RNA-templated
GO:0003824 F catalytic activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0004482 F mRNA (guanine-N7-)-methyltransferase activity
GO:0005524 F ATP binding
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0032259 P methylation
GO:0036265 P RNA (guanine-N7)-methylation
GO:0039689 P negative stranded viral RNA replication
FPKM:3.77 TPM:2.89
1283 A_BomoASG_c1191_g1_i1
334bp
FPKM:1.63 TPM:1.25
1284 A_BomoASG_c11921_g1_i1
506bp
FPKM:8.88 TPM:6.81
1285 A_BomoASG_c11922_g1_i1
365bp
FPKM:0.56 TPM:0.43
1286 A_BomoASG_c11926_g1_i1
301bp
FPKM:0.00 TPM:0.00
1287 A_BomoASG_c11926_g1_i2
347bp
FPKM:3.96 TPM:3.04
1288 A_BomoASG_c1192_g1_i1
499bp
FPKM:2.91 TPM:2.23
1289 A_BomoASG_c11932_g1_i1
707bp
FPKM:4.05 TPM:3.11
1290 A_BomoASG_c11934_g1_i1
447bp
FPKM:1.41 TPM:1.08
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