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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1231 A_BomoASG_c11852_g1_i1
460bp
FPKM:4.05 TPM:3.10
1232 A_BomoASG_c11853_g1_i1
251bp
 teneurin-a_isoform_X4_[Bombyx_mori]
FPKM:1.79 TPM:1.37
1233 A_BomoASG_c11854_g1_i1
1710bp
 protein_LTV1_homolog_[Bombyx_mori]
GO:0000056 P ribosomal small subunit export from nucleus
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0016049 P cell growth
GO:0022627 C cytosolic small ribosomal subunit
GO:0042023 P DNA endoreduplication
GO:0042274 P ribosomal small subunit biogenesis
GO:0045793 P positive regulation of cell size
FPKM:24.06 TPM:18.45
1234 A_BomoASG_c11855_g1_i1
551bp
FPKM:3.42 TPM:2.62
1235 A_BomoASG_c11856_g1_i1
250bp
 Uncharacterized_protein_OBRU01_23919,_partial_[Operophtera_brumata]
FPKM:3.61 TPM:2.77
1236 A_BomoASG_c11858_g1_i1
331bp
FPKM:1.66 TPM:1.27
1237 A_BomoASG_c11859_g1_i1
270bp
FPKM:2.51 TPM:1.93
1238 A_BomoASG_c11860_g1_i1
220bp
FPKM:4.23 TPM:3.24
1239 A_BomoASG_c11861_g1_i1
595bp
FPKM:14.58 TPM:11.18
1240 A_BomoASG_c11863_g1_i1
333bp
 uncharacterized_protein_LOC101736700_[Bombyx_mori]
FPKM:2.00 TPM:1.54
1241 A_BomoASG_c11865_g1_i1
431bp
 uncharacterized_protein_LOC101738384_isoform_X1_[Bombyx_mori]
FPKM:1.06 TPM:0.82
1242 A_BomoASG_c11867_g1_i1
263bp
 cyclin_3_isoform_X1_[Bombyx_mori]
FPKM:2.14 TPM:1.64
1243 A_BomoASG_c11868_g1_i1
333bp
FPKM:7.23 TPM:5.55
1244 A_BomoASG_c1186_g1_i1
279bp
 RUS1_family_protein_C16orf58_homolog_isoform_X1_[Bombyx_mori]
FPKM:10.29 TPM:7.89
1245 A_BomoASG_c11872_g1_i1
259bp
 uncharacterized_protein_LOC101737983_isoform_X9_[Bombyx_mori]
FPKM:2.21 TPM:1.70
1246 A_BomoASG_c11873_g1_i1
316bp
FPKM:0.73 TPM:0.56
1247 A_BomoASG_c11874_g1_i1
281bp
 glycerate_kinase_[Bombyx_mori]
FPKM:0.92 TPM:0.71
1248 A_BomoASG_c11877_g1_i1
438bp
 PREDICTED:_suppressor_of_hairless_protein,_partial_[Plutella_xylostella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000982 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001709 P cell fate determination
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007219 P Notch signaling pathway
GO:0007252 P I-kappaB phosphorylation
GO:0007275 P multicellular organism development
GO:0007451 P dorsal/ventral lineage restriction, imaginal disc
GO:0007616 P long-term memory
GO:0008356 P asymmetric cell division
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016360 P sensory organ precursor cell fate determination
GO:0017053 C transcription repressor complex
GO:0030097 P hemopoiesis
GO:0042683 P negative regulation of compound eye cone cell fate specification
GO:0042688 P crystal cell differentiation
GO:0043234 C protein-containing complex
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046331 P lateral inhibition
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
FPKM:0.62 TPM:0.48
1249 A_BomoASG_c11878_g1_i1
210bp
FPKM:0.00 TPM:0.00
1250 A_BomoASG_c11879_g1_i1
297bp
 A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_16_[Bombyx_mori]
FPKM:1.23 TPM:0.94
1251 A_BomoASG_c1187_g1_i1
207bp
FPKM:2.03 TPM:1.56
1252 A_BomoASG_c11882_g1_i1
254bp
FPKM:1.16 TPM:0.89
1253 A_BomoASG_c11883_g1_i1
388bp
FPKM:1.76 TPM:1.35
1254 A_BomoASG_c11885_g1_i1
209bp
 trypsin-1_isoform_X2_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005044 F scavenger receptor activity
GO:0005515 F protein binding
GO:0005903 C brush border
GO:0006508 P proteolysis
GO:0006898 P receptor-mediated endocytosis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
FPKM:2.96 TPM:2.27
1255 A_BomoASG_c11887_g1_i1
460bp
 carbohydrate_sulfotransferase_11_isoform_X1_[Bombyx_mori]
FPKM:1.54 TPM:1.18
1256 A_BomoASG_c11888_g1_i1
516bp
FPKM:1.95 TPM:1.50
1257 A_BomoASG_c1188_g1_i1
230bp
FPKM:0.00 TPM:0.00
1258 A_BomoASG_c11890_g1_i1
220bp
FPKM:1.69 TPM:1.30
1259 A_BomoASG_c11891_g1_i1
254bp
FPKM:5.79 TPM:4.44
1260 A_BomoASG_c11892_g1_i1
208bp
FPKM:0.00 TPM:0.00
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