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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1111 A_BomoASG_c11651_g1_i1
366bp
FPKM:1.94 TPM:1.49
1112 A_BomoASG_c11653_g1_i1
372bp
FPKM:1.08 TPM:0.83
1113 A_BomoASG_c11656_g1_i1
433bp
FPKM:1.27 TPM:0.97
1114 A_BomoASG_c11657_g1_i1
207bp
 ribosomal_protein_L23A_[Bombyx_mori]
GO:0000027 P ribosomal large subunit assembly
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0019843 F rRNA binding
GO:0022625 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0031932 C TORC2 complex
GO:0070180 F large ribosomal subunit rRNA binding
FPKM:3.05 TPM:2.34
1115 A_BomoASG_c11658_g1_i1
398bp
FPKM:0.97 TPM:0.74
1116 A_BomoASG_c11660_g1_i1
221bp
 hypothetical_protein_RR48_13816_[Papilio_machaon]
FPKM:2.50 TPM:1.92
1117 A_BomoASG_c11661_g1_i1
275bp
 retroelement_polyprotein_[Lasius_niger]
FPKM:3.38 TPM:2.59
1118 A_BomoASG_c11662_g1_i1
233bp
FPKM:1.44 TPM:1.11
1119 A_BomoASG_c11663_g1_i1
328bp
FPKM:3.38 TPM:2.59
1120 A_BomoASG_c11666_g1_i1
239bp
 PREDICTED:_uncharacterized_protein_LOC106721395_[Papilio_machaon]
FPKM:4.72 TPM:3.62
1121 A_BomoASG_c11669_g1_i1
225bp
FPKM:2.38 TPM:1.83
1122 A_BomoASG_c11671_g1_i1
259bp
 PAX3-_and_PAX7-binding_protein_1_[Bombyx_mori]
FPKM:3.32 TPM:2.55
1123 A_BomoASG_c11672_g1_i1
267bp
FPKM:5.16 TPM:3.96
1124 A_BomoASG_c11675_g1_i1
540bp
 venom_allergen_5_[Bombyx_mori]
GO:0005576 C extracellular region
FPKM:6.11 TPM:4.69
1125 A_BomoASG_c11676_g1_i1
221bp
FPKM:2.50 TPM:1.92
1126 A_BomoASG_c11677_g1_i1
270bp
FPKM:1.01 TPM:0.77
1127 A_BomoASG_c11678_g1_i1
534bp
 PREDICTED:_uncharacterized_protein_LOC106114667,_partial_[Papilio_xuthus]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.55 TPM:1.19
1128 A_BomoASG_c11679_g1_i1
259bp
FPKM:1.11 TPM:0.85
1129 A_BomoASG_c1167_g1_i1
350bp
 PREDICTED:_heat_shock_70_kDa_protein_cognate_4-like,_partial_[Rhinopithecus_roxellana]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
FPKM:3.00 TPM:2.30
1130 A_BomoASG_c11680_g1_i1
309bp
 olfactory_receptor_[Bombyx_mori]
FPKM:0.38 TPM:0.29
1131 A_BomoASG_c11682_g1_i1
216bp
 PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_[Solenopsis_invicta]
FPKM:2.68 TPM:2.05
1132 A_BomoASG_c11685_g1_i1
237bp
 selenium-binding_protein_1_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0008430 F selenium binding
GO:0015031 P protein transport
GO:0016020 C membrane
FPKM:4.81 TPM:3.69
1133 A_BomoASG_c11685_g1_i2
204bp
 selenium-binding_protein_1_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0008430 F selenium binding
GO:0015031 P protein transport
GO:0016020 C membrane
FPKM:2.15 TPM:1.65
1134 A_BomoASG_c11690_g1_i1
300bp
 PREDICTED:_zinc_finger_and_SCAN_domain-containing_protein_26_isoform_X13_[Papilio_xuthus]
FPKM:1.61 TPM:1.23
1135 A_BomoASG_c11691_g1_i1
204bp
FPKM:20.22 TPM:15.51
1136 A_BomoASG_c11693_g1_i1
393bp
FPKM:1.73 TPM:1.32
1137 A_BomoASG_c11696_g1_i1
353bp
FPKM:1.18 TPM:0.91
1138 A_BomoASG_c11699_g1_i1
404bp
FPKM:2.59 TPM:1.99
1139 A_BomoASG_c1169_g1_i1
698bp
 DNA-directed_RNA_polymerase_II_subunit_RPB7_[Bombyx_mori]
GO:0000291 P nuclear-transcribed mRNA catabolic process, exonucleolytic
GO:0000932 C P-body
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003697 F single-stranded DNA binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005665 C RNA polymerase II, core complex
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006915 P apoptotic process
GO:0031369 F translation initiation factor binding
GO:0045948 P positive regulation of translational initiation
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
FPKM:20.61 TPM:15.81
1140 A_BomoASG_c116_g1_i1
202bp
FPKM:5.49 TPM:4.21
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