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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c1169_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		DNA-directed_RNA_polymerase_II_subunit_RPB7_[Bombyx_mori]
Ontology
GO:0000291 P nuclear-transcribed mRNA catabolic process, exonucleolytic
GO:0000932 C P-body
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003697 F single-stranded DNA binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005665 C RNA polymerase II, core complex
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006915 P apoptotic process
GO:0031369 F translation initiation factor binding
GO:0045948 P positive regulation of translational initiation
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
Transcript
Level		FPKM:20.61 TPM:15.81
ORF EntryO_BomoASG156_complete:A_BomoASG_c1169_g1_i1
Sequence
(Nucleotide)
AAAATTAGCATGCAGTGTTGAGAGTTGATGCTGTTTATGTATATTACTAAAAAATAACAA
TAAAACAAATCTAATTGAATGGAATACTAATCGTAATTTGTCCACCGCTGAAAAATGTTC
TACCACATTTCATTGGAGCACGAAATTTTGTTACATCCGAAATATTTCGGTCCACAACTA
TTGGAGACAGTCAAACAGAAGCTATACACTGATGTGGAAGGCACCTGTACTGGCAAATAT
GGATTTGTCATCGCGGTAACTCAAATAGACAATATCGGAGCTGGTCTCATACAACATGGA
CAAGGGTTTGTCATGTACCCTGTTAAATACAAAGCTGTTGTGTTCAGACCATTCAAAGGA
GAAGTTTTAGATGGTATTGTCACACAAGTAAACAAGGTTGGCATGTTTGCGCAAATAGGA
CCTCTCAAATGTTTTATATCCCATCATTCAATACCAGACTATATGGAGTTCTGTCCTAAT
GTAAATCCTCCATGTTATAAGAGTAAACAAGAGGATAGCGTAATACAAGAAGAGGATGTG
ATCCGATTAAAGATTGTTGGTACGAGGGTTGACGCGAGTGGCATTTTTGCAATCGGGACT
TTAATTGGAGACTATTTGGGATTAGTACCACAATAACTTGAAATTTATGTAACACAATTA
CAGAACACGTTATGCGAAGGATTGAACTACCACGCAGA
(698 bp)

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