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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
91 A_SariMG_comp103115_c0_seq1
665bp
FPKM:3.87 TPM:3.88
92 A_SariMG_comp103122_c0_seq1
464bp
DNA_polymerase_epsilon_subunit_3_[Bombyx_mandarina]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008622 C epsilon DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046982 F protein heterodimerization activity
GO:0071897 P DNA biosynthetic process
FPKM:4.54 TPM:4.55
93 A_SariMG_comp103142_c0_seq1
916bp
hypothetical_protein_POPTR_0002s26240g_[Populus_trichocarpa]
FPKM:3.68 TPM:3.69
94 A_SariMG_comp103151_c0_seq1
688bp
PREDICTED:_DNA-directed_RNA_polymerase_III_subunit_RPC8_[Amyelois_transitella]
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005666 C RNA polymerase III complex
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0006384 P transcription initiation from RNA polymerase III promoter
GO:0032481 P positive regulation of type I interferon production
GO:0043231 C intracellular membrane-bounded organelle
GO:0045087 P innate immune response
GO:0051607 P defense response to virus
FPKM:3.66 TPM:3.67
95 A_SariMG_comp103173_c0_seq1
204bp
PREDICTED:_uncharacterized_protein_LOC106136448_[Amyelois_transitella]
FPKM:5.00 TPM:5.02
96 A_SariMG_comp103246_c0_seq1
207bp
FPKM:11.42 TPM:11.45
97 A_SariMG_comp103249_c0_seq1
1009bp
PREDICTED:_THO_complex_subunit_6_[Amyelois_transitella]
GO:0000347 C THO complex
GO:0003674 F molecular_function
GO:0006406 P mRNA export from nucleus
GO:0008283 P cell population proliferation
GO:0009408 P response to heat
FPKM:3.54 TPM:3.55
98 A_SariMG_comp103251_c0_seq1
355bp
FPKM:3.77 TPM:3.78
99 A_SariMG_comp103264_c0_seq1
744bp
FPKM:3.32 TPM:3.33
100 A_SariMG_comp103279_c0_seq1
755bp
FPKM:3.26 TPM:3.27
101 A_SariMG_comp103306_c0_seq1
226bp
FPKM:5.76 TPM:5.78
102 A_SariMG_comp103316_c0_seq1
230bp
FPKM:2.48 TPM:2.48
103 A_SariMG_comp103333_c0_seq1
409bp
FPKM:3.92 TPM:3.93
104 A_SariMG_comp103334_c0_seq1
305bp
FPKM:4.03 TPM:4.04
105 A_SariMG_comp103337_c0_seq1
517bp
FPKM:3.38 TPM:3.39
106 A_SariMG_comp103344_c0_seq1
1272bp
PREDICTED:_probable_tRNA_N6-adenosine_threonylcarbamoyltransferase,_mitochondrial_[Amyelois_transitella]
GO:0000408 C EKC/KEOPS complex
GO:0002949 P tRNA threonylcarbamoyladenosine modification
GO:0004222 F metalloendopeptidase activity
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008033 P tRNA processing
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0046872 F metal ion binding
GO:0061711 F N(6)-L-threonylcarbamoyladenine synthase activity
FPKM:3.56 TPM:3.57
107 A_SariMG_comp103461_c0_seq1
278bp
FPKM:4.83 TPM:4.84
108 A_SariMG_comp103499_c0_seq1
289bp
FPKM:4.14 TPM:4.15
109 A_SariMG_comp103505_c0_seq1
901bp
FPKM:2.76 TPM:2.77
110 A_SariMG_comp103516_c0_seq1
1029bp
Glucosidase_ii_beta_subunit_[Operophtera_brumata]
GO:0005080 F protein kinase C binding
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006457 P protein folding
GO:0006491 P N-glycan processing
GO:0035556 P intracellular signal transduction
GO:0044325 F transmembrane transporter binding
GO:0046872 F metal ion binding
GO:0051219 F phosphoprotein binding
FPKM:3.87 TPM:3.88
111 A_SariMG_comp103684_c0_seq1
334bp
FPKM:3.24 TPM:3.25
112 A_SariMG_comp1036973_c0_seq1
228bp
FPKM:0.56 TPM:0.56
113 A_SariMG_comp103739_c0_seq1
1948bp
PREDICTED:_integral_membrane_protein_GPR180-like_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019236 P response to pheromone
FPKM:3.45 TPM:3.46
114 A_SariMG_comp103756_c0_seq1
494bp
FPKM:2.08 TPM:2.08
115 A_SariMG_comp103774_c0_seq1
1012bp
PREDICTED:_CAAX_prenyl_protease_2_[Papilio_machaon]
GO:0004197 F cysteine-type endopeptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0071586 P CAAX-box protein processing
FPKM:3.14 TPM:3.14
116 A_SariMG_comp103781_c0_seq1
491bp
FPKM:3.91 TPM:3.92
117 A_SariMG_comp103795_c0_seq1
736bp
FPKM:4.06 TPM:4.07
118 A_SariMG_comp1038145_c0_seq1
272bp
PREDICTED:_uncharacterized_protein_LOC105459988_isoform_X2_[Wasmannia_auropunctata]
FPKM:0.56 TPM:0.56
119 A_SariMG_comp103817_c0_seq1
399bp
endonuclease-reverse_transcriptase_[Danaus_plexippus]
FPKM:2.18 TPM:2.19
120 A_SariMG_comp103820_c0_seq1
1687bp
FPKM:3.80 TPM:3.81
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