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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
751 A_SariMG_comp123067_c0_seq1
380bp
FPKM:4.09 TPM:4.10
752 A_SariMG_comp123071_c0_seq1
1881bp
PREDICTED:_LOW_QUALITY_PROTEIN:_serine/threonine-protein_kinase_PRP4_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005694 C chromosome
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0008380 P RNA splicing
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
FPKM:2.93 TPM:2.94
753 A_SariMG_comp123091_c0_seq1
281bp
FPKM:1.93 TPM:1.93
754 A_SariMG_comp123106_c0_seq1
346bp
FPKM:2.03 TPM:2.03
755 A_SariMG_comp123140_c0_seq1
767bp
FPKM:2.38 TPM:2.38
756 A_SariMG_comp123170_c0_seq1
581bp
PREDICTED:_chorion_class_A_proteins_Ld9-like_[Papilio_machaon]
GO:0005213 F structural constituent of egg chorion
GO:0007275 P multicellular organism development
GO:0007304 P chorion-containing eggshell formation
GO:0042600 C egg chorion
FPKM:3.61 TPM:3.62
757 A_SariMG_comp123174_c0_seq1
1055bp
PREDICTED:_DNA_excision_repair_protein_ERCC-1_[Amyelois_transitella]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000109 C nucleotide-excision repair complex
GO:0000110 C nucleotide-excision repair factor 1 complex
GO:0000720 P pyrimidine dimer repair by nucleotide-excision repair
GO:0000784 C chromosome, telomeric region
GO:0001094 F TFIID-class transcription factor complex binding
GO:0001302 P obsolete replicative cell aging
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006293 P nucleotide-excision repair, preincision complex stabilization
GO:0006295 P nucleotide-excision repair, DNA incision, 3'-to lesion
GO:0006296 P nucleotide-excision repair, DNA incision, 5'-to lesion
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006312 P mitotic recombination
GO:0006949 P syncytium formation
GO:0006974 P cellular response to DNA damage stimulus
GO:0006979 P response to oxidative stress
GO:0007281 P germ cell development
GO:0007283 P spermatogenesis
GO:0007584 P response to nutrient
GO:0008022 F protein C-terminus binding
GO:0008283 P cell population proliferation
GO:0008584 P male gonad development
GO:0009650 P UV protection
GO:0009744 P response to sucrose
GO:0010165 P response to X-ray
GO:0010259 P multicellular organism aging
GO:0016787 F hydrolase activity
GO:0019904 F protein domain specific binding
GO:0032205 P negative regulation of telomere maintenance
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0035166 P post-embryonic hemopoiesis
GO:0035264 P multicellular organism growth
GO:0036297 P interstrand cross-link repair
GO:0043566 F DNA binding
GO:0045190 P isotype switching
GO:0048468 P cell development
GO:0048477 P oogenesis
GO:0048568 P embryonic organ development
GO:0051276 P chromosome organization
GO:0070522 C ERCC4-ERCC1 complex
GO:0070911 P global genome nucleotide-excision repair
GO:0090656 P t-circle formation
GO:1904431 P positive regulation of t-circle formation
FPKM:3.33 TPM:3.34
758 A_SariMG_comp123179_c0_seq1
771bp
PREDICTED:_rRNA-processing_protein_FCF1_homolog_[Papilio_polytes]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
FPKM:3.10 TPM:3.11
759 A_SariMG_comp123188_c0_seq1
260bp
FPKM:1.65 TPM:1.65
760 A_SariMG_comp123193_c0_seq1
211bp
hypothetical_protein_PVBG_01930_[Plasmodium_vivax_Brazil_I]
FPKM:1.74 TPM:1.75
761 A_SariMG_comp123213_c0_seq1
997bp
FPKM:2.42 TPM:2.43
762 A_SariMG_comp123225_c0_seq1
228bp
PREDICTED:_uncharacterized_protein_LOC105180887_[Harpegnathos_saltator]
FPKM:4.50 TPM:4.52
763 A_SariMG_comp123234_c0_seq1
498bp
FPKM:3.08 TPM:3.09
764 A_SariMG_comp123249_c0_seq1
293bp
FPKM:4.03 TPM:4.04
765 A_SariMG_comp123251_c0_seq1
432bp
FPKM:3.02 TPM:3.03
766 A_SariMG_comp123260_c0_seq1
299bp
FPKM:3.25 TPM:3.26
767 A_SariMG_comp12327_c0_seq1
214bp
FPKM:1.00 TPM:1.01
768 A_SariMG_comp123280_c0_seq1
783bp
FPKM:2.51 TPM:2.52
769 A_SariMG_comp123311_c0_seq1
502bp
FPKM:3.79 TPM:3.80
770 A_SariMG_comp123329_c0_seq1
309bp
FPKM:3.64 TPM:3.65
771 A_SariMG_comp123353_c0_seq1
202bp
FPKM:1.98 TPM:1.99
772 A_SariMG_comp123367_c0_seq1
268bp
FPKM:2.51 TPM:2.52
773 A_SariMG_comp123370_c0_seq1
1205bp
PREDICTED:_histone-lysine_N-methyltransferase_SETMAR-like_[Camponotus_floridanus]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:2.04 TPM:2.05
774 A_SariMG_comp123402_c0_seq1
338bp
hypothetical_protein_HMPREF3219_0201367_[Streptococcus_salivarius]
FPKM:4.84 TPM:4.86
775 A_SariMG_comp123430_c0_seq1
338bp
FPKM:3.85 TPM:3.86
776 A_SariMG_comp123472_c0_seq1
419bp
FPKM:3.69 TPM:3.70
777 A_SariMG_comp123481_c0_seq1
364bp
FPKM:4.94 TPM:4.95
778 A_SariMG_comp123499_c0_seq1
210bp
FPKM:3.88 TPM:3.89
779 A_SariMG_comp123509_c0_seq1
433bp
PREDICTED:_LOW_QUALITY_PROTEIN:_BTB/POZ_domain-containing_protein_7_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0060693 P regulation of branching involved in salivary gland morphogenesis
FPKM:4.02 TPM:4.03
780 A_SariMG_comp123527_c0_seq1
1423bp
PREDICTED:_biorientation_of_chromosomes_in_cell_division_protein_1-like_1_[Amyelois_transitella]
FPKM:2.81 TPM:2.82
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