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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
721 A_SariMG_comp122033_c0_seq1
402bp
FPKM:3.28 TPM:3.29
722 A_SariMG_comp122131_c0_seq1
272bp
FPKM:0.56 TPM:0.56
723 A_SariMG_comp12228_c0_seq1
211bp
FPKM:0.70 TPM:0.70
724 A_SariMG_comp122327_c0_seq1
1394bp
PREDICTED:_nuclear_pore_complex_protein_Nup133_[Amyelois_transitella]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000940 C outer kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006999 P nuclear pore organization
GO:0007062 P sister chromatid cohesion
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0021915 P neural tube development
GO:0022008 P neurogenesis
GO:0031047 P gene silencing by RNA
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0048339 P paraxial mesoderm development
GO:0051028 P mRNA transport
GO:0061053 P somite development
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
FPKM:3.70 TPM:3.71
725 A_SariMG_comp122393_c0_seq1
1226bp
FPKM:1.80 TPM:1.80
726 A_SariMG_comp122405_c0_seq1
255bp
Golgi-associated_plant_pathogenesis-related_protein_1_[Papilio_xuthus]
FPKM:1.29 TPM:1.29
727 A_SariMG_comp122439_c0_seq1
211bp
FPKM:1.39 TPM:1.40
728 A_SariMG_comp122633_c0_seq1
1023bp
FPKM:2.65 TPM:2.66
729 A_SariMG_comp122649_c0_seq1
530bp
FPKM:2.95 TPM:2.96
730 A_SariMG_comp122695_c0_seq1
377bp
FPKM:4.14 TPM:4.16
731 A_SariMG_comp122744_c0_seq1
215bp
FPKM:1.98 TPM:1.98
732 A_SariMG_comp122763_c0_seq1
349bp
bifunctional_uroporphyrinogen-III_synthetase/response_regulator_domain_protein_[Pseudonocardia_sp._AL041005-10]
FPKM:1.53 TPM:1.53
733 A_SariMG_comp122772_c0_seq1
546bp
FPKM:1.63 TPM:1.63
734 A_SariMG_comp122784_c0_seq1
274bp
FPKM:5.90 TPM:5.91
735 A_SariMG_comp122887_c0_seq1
398bp
FPKM:3.14 TPM:3.15
736 A_SariMG_comp12288_c0_seq1
244bp
PREDICTED:_acyl-coenzyme_A_oxidase_3,_peroxisomal-like_[Populus_euphratica]
FPKM:0.71 TPM:0.72
737 A_SariMG_comp122905_c0_seq1
835bp
FPKM:2.92 TPM:2.93
738 A_SariMG_comp122912_c0_seq1
1071bp
caspase-1_[Manduca_sexta]
GO:0004197 F cysteine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0006915 P apoptotic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
FPKM:2.39 TPM:2.39
739 A_SariMG_comp122931_c0_seq1
1029bp
FPKM:2.77 TPM:2.78
740 A_SariMG_comp122937_c0_seq1
925bp
PREDICTED:_coiled-coil_domain-containing_protein_97_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005686 C U2 snRNP
GO:0008150 P biological_process
FPKM:3.20 TPM:3.21
741 A_SariMG_comp122947_c0_seq1
361bp
FPKM:3.56 TPM:3.57
742 A_SariMG_comp122964_c0_seq1
440bp
hypothetical_protein_RSAG8_13298,_partial_[Rhizoctonia_solani_AG-8_WAC10335]
FPKM:3.27 TPM:3.28
743 A_SariMG_comp122976_c0_seq1
775bp
cuticular_protein_RR-1_motif_56_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
FPKM:3.62 TPM:3.63
744 A_SariMG_comp123009_c0_seq1
962bp
PREDICTED:_RRP15-like_protein_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:2.93 TPM:2.94
745 A_SariMG_comp123016_c0_seq1
728bp
FPKM:2.83 TPM:2.83
746 A_SariMG_comp123018_c0_seq1
3558bp
putative_laminin_A_chain_[Danaus_plexippus]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0008021 C synaptic vesicle
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0010906 P regulation of glucose metabolic process
GO:0016321 P female meiosis chromosome segregation
GO:0030054 C cell junction
GO:0030155 P regulation of cell adhesion
GO:0030334 P regulation of cell migration
GO:0030424 C axon
GO:0031410 C cytoplasmic vesicle
GO:0031987 P locomotion involved in locomotory behavior
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035011 P melanotic encapsulation of foreign target
GO:0036062 C presynaptic periactive zone
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0045995 P regulation of embryonic development
GO:0048598 P embryonic morphogenesis
GO:0048854 P brain morphogenesis
FPKM:1.73 TPM:1.74
747 A_SariMG_comp123026_c0_seq1
1785bp
FPKM:2.55 TPM:2.56
748 A_SariMG_comp123044_c0_seq1
299bp
T29578_hypothetical_protein_M03A1.5_-_Caenorhabditis_elegans
FPKM:1.55 TPM:1.55
749 A_SariMG_comp123051_c0_seq1
782bp
FPKM:2.97 TPM:2.98
750 A_SariMG_comp123066_c0_seq1
2177bp
Vacuolar_protein_sorting_[Operophtera_brumata]
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0006810 P transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0007032 P endosome organization
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019905 F syntaxin binding
GO:0030123 C AP-3 adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030348 F syntaxin-3 binding
GO:0030897 C HOPS complex
GO:0031091 C platelet alpha granule
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0032400 P melanosome localization
GO:0032418 P lysosome localization
GO:0035855 P megakaryocyte development
GO:0048471 C perinuclear region of cytoplasm
GO:0055037 C recycling endosome
GO:0061025 P membrane fusion
GO:0070889 P platelet alpha granule organization
GO:0071439 C clathrin complex
GO:0090330 P regulation of platelet aggregation
FPKM:2.31 TPM:2.32
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