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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

A_SariMG_comp100_c0_seq1

204bp

prophenoloxidase-activating_proteinase_[Samia_ricini]

GO:0004252	F	serine-type endopeptidase activity
GO:0006508	P	proteolysis
GO:0008233	F	peptidase activity
GO:0008236	F	serine-type peptidase activity
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016787	F	hydrolase activity

FPKM:0.77 TPM:0.77

A_SariMG_comp101008_c0_seq1

313bp

FPKM:3.13 TPM:3.14

A_SariMG_comp101023_c0_seq1

948bp

FPKM:3.84 TPM:3.85

A_SariMG_comp1010462_c0_seq1

230bp

PREDICTED:_integrin_alpha-PS3-like_[Papilio_xuthus]

FPKM:0.28 TPM:0.28

A_SariMG_comp101075_c0_seq1

366bp

FPKM:5.87 TPM:5.89

A_SariMG_comp101087_c0_seq1

2408bp

Inhibitor_of_nuclear_factor_kappa_B_kinase_beta_subunit_[Operophtera_brumata]

GO:0000166	F	nucleotide binding
GO:0002223	P	stimulatory C-type lectin receptor signaling pathway
GO:0003009	P	skeletal muscle contraction
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0006468	P	protein phosphorylation
GO:0006954	P	inflammatory response
GO:0007249	P	I-kappaB kinase/NF-kappaB signaling
GO:0007252	P	I-kappaB phosphorylation
GO:0008284	P	positive regulation of cell population proliferation
GO:0008384	F	IkappaB kinase activity
GO:0008385	C	IkappaB kinase complex
GO:0009615	P	response to virus
GO:0009636	P	response to toxic substance
GO:0009898	C	cytoplasmic side of plasma membrane
GO:0010803	P	regulation of tumor necrosis factor-mediated signaling pathway
GO:0010976	P	positive regulation of neuron projection development
GO:0016020	C	membrane
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0019901	F	protein kinase binding
GO:0030866	P	cortical actin cytoskeleton organization
GO:0031175	P	neuron projection development
GO:0032496	P	response to lipopolysaccharide
GO:0033209	P	tumor necrosis factor-mediated signaling pathway
GO:0035509	P	negative regulation of myosin-light-chain-phosphatase activity
GO:0035631	C	CD40 receptor complex
GO:0035666	P	TRIF-dependent toll-like receptor signaling pathway
GO:0038095	P	Fc-epsilon receptor signaling pathway
GO:0042325	P	regulation of phosphorylation
GO:0042493	P	response to xenobiotic stimulus
GO:0042501	P	serine phosphorylation of STAT protein
GO:0042803	F	protein homodimerization activity
GO:0043066	P	negative regulation of apoptotic process
GO:0043123	P	positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231	C	intracellular membrane-bounded organelle
GO:0045087	P	innate immune response
GO:0045121	C	membrane raft
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045944	P	positive regulation of transcription by RNA polymerase II
GO:0046982	F	protein heterodimerization activity
GO:0050852	P	T cell receptor signaling pathway
GO:0051092	P	positive regulation of NF-kappaB transcription factor activity
GO:0051403	P	stress-activated MAPK cascade
GO:0070423	P	nucleotide-binding oligomerization domain containing signaling pathway
GO:0070498	P	interleukin-1-mediated signaling pathway
GO:0070542	P	response to fatty acid
GO:0071356	P	cellular response to tumor necrosis factor
GO:0090002	P	protein localization to plasma membrane
GO:0097110	F	scaffold protein binding
GO:1901216	P	positive regulation of neuron death
GO:1903140	P	regulation of establishment of endothelial barrier
GO:1903347	P	negative regulation of bicellular tight junction assembly

FPKM:3.22 TPM:3.23

A_SariMG_comp101128_c0_seq1

556bp

FPKM:3.82 TPM:3.84

A_SariMG_comp101197_c0_seq1

3822bp

PREDICTED:_F-BAR_and_double_SH3_domains_protein_2_[Amyelois_transitella]

GO:0005515

protein binding

FPKM:2.75 TPM:2.76

A_SariMG_comp101209_c0_seq1

291bp

hypothetical_protein_ANCDUO_10398_[Ancylostoma_duodenale]

FPKM:6.04 TPM:6.06

A_SariMG_comp101222_c0_seq1

536bp

PREDICTED:_coiled-coil_domain-containing_protein_58_[Amyelois_transitella]

GO:0005739

mitochondrion

FPKM:4.14 TPM:4.15

A_SariMG_comp101229_c0_seq1

407bp

hypothetical_protein_[Pseudomonas_stutzeri]

FPKM:5.15 TPM:5.16

A_SariMG_comp101230_c0_seq1

524bp

FPKM:4.27 TPM:4.28

A_SariMG_comp101262_c0_seq1

265bp

FPKM:3.36 TPM:3.37

A_SariMG_comp101281_c0_seq1

382bp

conserved_hypothetical_protein_[Phytophthora_infestans_T30-4]

FPKM:3.86 TPM:3.87

A_SariMG_comp101322_c0_seq1

620bp

hypothetical_protein_[Desulfovibrio_africanus]

FPKM:4.84 TPM:4.85

A_SariMG_comp101355_c0_seq1

894bp

FPKM:3.04 TPM:3.05

A_SariMG_comp1013951_c0_seq1

243bp

FPKM:0.72 TPM:0.72

A_SariMG_comp101403_c0_seq1

431bp

FPKM:2.95 TPM:2.96

A_SariMG_comp101431_c0_seq1

1128bp

deoxyguanosinetriphosphate_triphosphohydrolase_[Paramesorhizobium_deserti]

FPKM:2.64 TPM:2.65

A_SariMG_comp101495_c0_seq1

406bp

FPKM:2.86 TPM:2.87

A_SariMG_comp101498_c0_seq1

2083bp

PREDICTED:_integrator_complex_subunit_10_[Amyelois_transitella]

GO:0003674	F	molecular_function
GO:0005634	C	nucleus
GO:0016180	P	snRNA processing
GO:0032039	C	integrator complex

FPKM:4.10 TPM:4.12

A_SariMG_comp101499_c0_seq1

397bp

FPKM:4.68 TPM:4.69

A_SariMG_comp1014_c0_seq1

351bp

NADH-plastoquinone_oxidoreductase_subunit_4_[Canna_indica]

GO:0008137	F	NADH dehydrogenase (ubiquinone) activity
GO:0009507	C	chloroplast
GO:0009535	C	chloroplast thylakoid membrane
GO:0009536	C	plastid
GO:0009579	C	thylakoid
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016491	F	oxidoreductase activity
GO:0016655	F	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
GO:0042773	P	ATP synthesis coupled electron transport
GO:0048038	F	quinone binding
GO:0055114	P	obsolete oxidation-reduction process