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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
301 A_SariMG_comp109642_c0_seq1
860bp
FPKM:3.09 TPM:3.10
302 A_SariMG_comp1097083_c0_seq1
247bp
genomic_island_protein_[Pseudomonas_aeruginosa]
FPKM:0.69 TPM:0.70
303 A_SariMG_comp109708_c0_seq1
318bp
FPKM:3.73 TPM:3.75
304 A_SariMG_comp1097211_c0_seq1
228bp
PREDICTED:_expansin-A14-like_[Nelumbo_nucifera]
FPKM:0.56 TPM:0.56
305 A_SariMG_comp109836_c0_seq1
502bp
FPKM:0.88 TPM:0.88
306 A_SariMG_comp109839_c0_seq1
398bp
FPKM:2.85 TPM:2.86
307 A_SariMG_comp1099468_c0_seq1
208bp
AraC_family_transcriptional_regulator_[Novosphingobium_tardaugens]
FPKM:0.73 TPM:0.73
308 A_SariMG_comp109961_c0_seq1
719bp
FPKM:3.59 TPM:3.60
309 A_SariMG_comp109981_c0_seq1
411bp
hypothetical_protein_VIGAN_03035700_[Vigna_angularis_var._angularis]
FPKM:3.53 TPM:3.54
310 A_SariMG_comp109_c0_seq1
213bp
FPKM:1.02 TPM:1.02
311 A_SariMG_comp110117_c0_seq1
411bp
FPKM:3.17 TPM:3.18
312 A_SariMG_comp110167_c0_seq1
366bp
FPKM:3.80 TPM:3.82
313 A_SariMG_comp11020_c0_seq1
281bp
FPKM:0.70 TPM:0.70
314 A_SariMG_comp110271_c0_seq1
301bp
hydrolase_NUDIX_family_[Clostridium_sp._CAG:352]
FPKM:2.76 TPM:2.76
315 A_SariMG_comp110290_c0_seq1
1856bp
PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Papilio_machaon]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:3.57 TPM:3.58
316 A_SariMG_comp110299_c0_seq1
1867bp
PREDICTED:_2',5'-phosphodiesterase_12_[Amyelois_transitella]
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006397 P mRNA processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
FPKM:2.92 TPM:2.93
317 A_SariMG_comp1103122_c0_seq1
224bp
FPKM:0.29 TPM:0.30
318 A_SariMG_comp110374_c0_seq1
1239bp
serpin_5_[Bombyx_mandarina]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
GO:0042176 P regulation of protein catabolic process
FPKM:3.91 TPM:3.92
319 A_SariMG_comp110433_c0_seq1
760bp
Glutathione_S-transferase_epsilon_6,_partial_[Operophtera_brumata]
GO:0004364 F glutathione transferase activity
GO:0008152 P metabolic process
GO:0016740 F transferase activity
FPKM:4.77 TPM:4.78
320 A_SariMG_comp110493_c0_seq1
489bp
FPKM:2.39 TPM:2.39
321 A_SariMG_comp1104_c0_seq1
252bp
TRAP_ABC_transporter_substrate-binding_protein_[Oribacterium_sp._oral_taxon_078]
FPKM:0.66 TPM:0.66
322 A_SariMG_comp110505_c0_seq1
864bp
FPKM:3.71 TPM:3.72
323 A_SariMG_comp110516_c0_seq1
644bp
FPKM:2.77 TPM:2.77
324 A_SariMG_comp110520_c0_seq1
215bp
reverse_transcriptase_[Ostrinia_nubilalis]
FPKM:6.27 TPM:6.28
325 A_SariMG_comp110524_c0_seq1
1376bp
PREDICTED:_chromosome_transmission_fidelity_protein_18_homolog_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
FPKM:3.75 TPM:3.76
326 A_SariMG_comp110527_c0_seq1
371bp
FPKM:2.02 TPM:2.03
327 A_SariMG_comp110572_c0_seq1
525bp
FPKM:2.99 TPM:3.00
328 A_SariMG_comp110590_c0_seq1
2052bp
PREDICTED:_zinc_finger_CCHC_domain-containing_protein_2_isoform_X1_[Papilio_xuthus]
GO:0003676 F nucleic acid binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0035091 F phosphatidylinositol binding
GO:0046872 F metal ion binding
FPKM:2.30 TPM:2.30
329 A_SariMG_comp110612_c0_seq1
823bp
FPKM:3.43 TPM:3.44
330 A_SariMG_comp110669_c0_seq1
532bp
Os07g0148500_[Oryza_sativa_Japonica_Group]
FPKM:4.00 TPM:4.01
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