SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

next from show/52479
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1 A_SariMG_comp100024_c0_seq1
467bp
PREDICTED:_coiled-coil-helix-coiled-coil-helix_domain-containing_protein_7_isoform_X1_[Amyelois_transitella]
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
FPKM:4.72 TPM:4.73
2 A_SariMG_comp100062_c0_seq1
474bp
putative_beta_prime_cop_protein_[Leishmania_braziliensis_MHOM/BR/75/M2904]
FPKM:4.47 TPM:4.49
3 A_SariMG_comp100096_c0_seq1
853bp
PREDICTED:_LOW_QUALITY_PROTEIN:_integrator_complex_subunit_12_[Bombyx_mori]
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:3.56 TPM:3.57
4 A_SariMG_comp100137_c0_seq1
480bp
FPKM:2.95 TPM:2.96
5 A_SariMG_comp100142_c0_seq1
1348bp
PREDICTED:_THAP_domain-containing_protein_1-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005730 C nucleolus
GO:0046872 F metal ion binding
FPKM:4.42 TPM:4.44
6 A_SariMG_comp1001589_c0_seq1
257bp
FPKM:0.63 TPM:0.64
7 A_SariMG_comp1002309_c0_seq1
207bp
hypothetical_protein_AALP_AA6G123800_[Arabis_alpina]
FPKM:0.74 TPM:0.74
8 A_SariMG_comp100236_c0_seq1
706bp
FPKM:2.94 TPM:2.95
9 A_SariMG_comp1002431_c0_seq1
229bp
FPKM:0.56 TPM:0.56
10 A_SariMG_comp10028_c0_seq1
208bp
PREDICTED:_fatty_acyl-CoA_reductase_1-like_[Amyelois_transitella]
FPKM:1.09 TPM:1.09
11 A_SariMG_comp100294_c0_seq1
903bp
FPKM:4.13 TPM:4.14
12 A_SariMG_comp1002953_c0_seq1
219bp
FPKM:0.63 TPM:0.63
13 A_SariMG_comp100390_c0_seq1
503bp
hypothetical_protein_RR48_06353_[Papilio_machaon]
FPKM:3.71 TPM:3.72
14 A_SariMG_comp1004331_c0_seq1
209bp
chemotaxis_protein_CheY_[Candidatus_Magnetomorum_sp._HK-1]
FPKM:1.07 TPM:1.08
15 A_SariMG_comp100743_c0_seq1
261bp
FPKM:0.61 TPM:0.61
16 A_SariMG_comp100758_c0_seq1
269bp
FPKM:0.77 TPM:0.77
17 A_SariMG_comp1007792_c0_seq1
221bp
PREDICTED:_protein_unc-80_homolog_[Bombyx_mori]
GO:0005261 F cation channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034703 C cation channel complex
GO:0045475 P locomotor rhythm
GO:0055080 P cation homeostasis
GO:0098655 P cation transmembrane transport
FPKM:0.92 TPM:0.92
18 A_SariMG_comp100893_c0_seq1
811bp
FPKM:3.06 TPM:3.07
19 A_SariMG_comp100894_c0_seq1
1615bp
PREDICTED:_rotatin-like_isoform_X2_[Bombyx_mori]
FPKM:3.54 TPM:3.55
20 A_SariMG_comp100898_c0_seq1
586bp
PREDICTED:_uncharacterized_protein_LOC106129800_[Amyelois_transitella]
FPKM:3.89 TPM:3.91
21 A_SariMG_comp10089_c0_seq1
250bp
PREDICTED:_coiled-coil_domain-containing_protein_112-like_[Papilio_xuthus]
FPKM:1.12 TPM:1.13
22 A_SariMG_comp100910_c0_seq1
442bp
FPKM:4.95 TPM:4.97
23 A_SariMG_comp100913_c0_seq1
351bp
FPKM:2.68 TPM:2.69
24 A_SariMG_comp100919_c0_seq1
1259bp
putative_uroporphyrinogen-III_synthase-like_protein_[Danaus_plexippus]
GO:0004852 F uroporphyrinogen-III synthase activity
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006779 P porphyrin-containing compound biosynthetic process
GO:0006780 P uroporphyrinogen III biosynthetic process
GO:0006782 P protoporphyrinogen IX biosynthetic process
GO:0006783 P heme biosynthetic process
GO:0016829 F lyase activity
GO:0033014 P tetrapyrrole biosynthetic process
GO:0046677 P response to antibiotic
GO:0048037 F obsolete cofactor binding
GO:0071243 P cellular response to arsenic-containing substance
GO:0071418 P cellular response to amine stimulus
FPKM:2.44 TPM:2.45
25 A_SariMG_comp100920_c0_seq1
446bp
FPKM:4.73 TPM:4.74
26 A_SariMG_comp100925_c0_seq1
333bp
FPKM:4.59 TPM:4.60
27 A_SariMG_comp100937_c0_seq1
623bp
FPKM:3.90 TPM:3.91
28 A_SariMG_comp100943_c0_seq1
222bp
FPKM:2.11 TPM:2.12
29 A_SariMG_comp100958_c0_seq1
278bp
Nitric_oxide_reductase_FlRd-NAD(+)_reductase_[Talaromyces_marneffei_PM1]
FPKM:4.47 TPM:4.49
30 A_SariMG_comp100981_c0_seq1
1017bp
FPKM:3.45 TPM:3.46
next from show/52479

- SilkBase 1999-2023 -