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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
991 A_BomoN4EE_TR100565_c0_g1_i2
1636bp
FPKM:0.96 TPM:1.28
992 A_BomoN4EE_TR100566_c0_g1_i1
1295bp
FPKM:5.55 TPM:7.39
993 A_BomoN4EE_TR100567_c0_g1_i1
447bp
 putative_protein_lysine_methyltransferase_SET5_[Cryptococcus_gattii_CA1280]
FPKM:1.82 TPM:2.43
994 A_BomoN4EE_TR100568_c0_g1_i1
466bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.39 TPM:0.52
995 A_BomoN4EE_TR100568_c0_g2_i1
825bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.40 TPM:3.19
996 A_BomoN4EE_TR100569_c0_g1_i1
618bp
 programmed_cell_death_protein_5-like_protein_[Bombyx_mori]
FPKM:3.00 TPM:4.00
997 A_BomoN4EE_TR10056_c0_g1_i1
348bp
 olfactory_receptor_[Bombyx_mori]
FPKM:0.37 TPM:0.49
998 A_BomoN4EE_TR100570_c0_g1_i1
3107bp
 Protein_transport_protein_sec13_[Operophtera_brumata]
GO:0000776 C kinetochore
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0031080 C nuclear pore outer ring
GO:0031410 C cytoplasmic vesicle
GO:0032008 P positive regulation of TOR signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0051028 P mRNA transport
GO:0061700 C GATOR2 complex
GO:0070062 C extracellular exosome
FPKM:41.99 TPM:55.94
999 A_BomoN4EE_TR100570_c0_g1_i2
9409bp
 PREDICTED:_DNA_polymerase_epsilon_catalytic_subunit_A_[Amyelois_transitella]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000731 P DNA synthesis involved in DNA repair
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006287 P base-excision repair, gap-filling
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0008408 F 3'-5' exonuclease activity
GO:0008622 C epsilon DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:11.60 TPM:15.45
1000 A_BomoN4EE_TR100570_c0_g1_i3
1376bp
 PREDICTED:_uncharacterized_protein_LOC106136250_[Amyelois_transitella]
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051090 P regulation of DNA-binding transcription factor activity
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
FPKM:15.33 TPM:20.42
1001 A_BomoN4EE_TR100571_c0_g1_i1
6187bp
FPKM:7.11 TPM:9.46
1002 A_BomoN4EE_TR100571_c0_g2_i1
6188bp
FPKM:0.49 TPM:0.66
1003 A_BomoN4EE_TR100572_c0_g1_i1
2047bp
 PREDICTED:_tetracycline_resistance_protein,_class_D-like_[Amyelois_transitella]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:3.77 TPM:5.02
1004 A_BomoN4EE_TR100572_c0_g1_i2
1527bp
 PREDICTED:_tetracycline_resistance_protein,_class_D-like_[Amyelois_transitella]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:9.87 TPM:13.14
1005 A_BomoN4EE_TR100572_c1_g1_i1
351bp
FPKM:0.00 TPM:0.00
1006 A_BomoN4EE_TR100572_c1_g1_i2
641bp
FPKM:0.30 TPM:0.40
1007 A_BomoN4EE_TR100572_c1_g1_i3
449bp
FPKM:0.00 TPM:0.00
1008 A_BomoN4EE_TR100572_c1_g1_i4
543bp
FPKM:0.36 TPM:0.48
1009 A_BomoN4EE_TR100572_c2_g1_i1
786bp
FPKM:1.08 TPM:1.43
1010 A_BomoN4EE_TR100573_c0_g1_i1
1780bp
 PREDICTED:_homeobox_even-skipped_homolog_protein_1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001709 P cell fate determination
GO:0003007 P heart morphogenesis
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007350 P blastoderm segmentation
GO:0007366 P periodic partitioning by pair rule gene
GO:0007376 P cephalic furrow formation
GO:0007377 P germ-band extension
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0007512 P adult heart development
GO:0007517 P muscle organ development
GO:0008045 P motor neuron axon guidance
GO:0008595 P anterior/posterior axis specification, embryo
GO:0009997 P negative regulation of cardioblast cell fate specification
GO:0035289 P posterior head segmentation
GO:0035290 P trunk segmentation
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050770 P regulation of axonogenesis
GO:1901739 P regulation of myoblast fusion
FPKM:2.65 TPM:3.53
1011 A_BomoN4EE_TR100573_c0_g2_i1
1781bp
 PREDICTED:_homeobox_even-skipped_homolog_protein_1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001709 P cell fate determination
GO:0003007 P heart morphogenesis
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007350 P blastoderm segmentation
GO:0007366 P periodic partitioning by pair rule gene
GO:0007376 P cephalic furrow formation
GO:0007377 P germ-band extension
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0007512 P adult heart development
GO:0007517 P muscle organ development
GO:0008045 P motor neuron axon guidance
GO:0008595 P anterior/posterior axis specification, embryo
GO:0009997 P negative regulation of cardioblast cell fate specification
GO:0035289 P posterior head segmentation
GO:0035290 P trunk segmentation
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050770 P regulation of axonogenesis
GO:1901739 P regulation of myoblast fusion
FPKM:0.00 TPM:0.00
1012 A_BomoN4EE_TR100574_c0_g1_i1
1749bp
 PREDICTED:_activating_signal_cointegrator_1_complex_subunit_2_isoform_X1_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
FPKM:3.13 TPM:4.17
1013 A_BomoN4EE_TR100574_c0_g1_i2
1366bp
 PREDICTED:_activating_signal_cointegrator_1_complex_subunit_2_isoform_X1_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
FPKM:6.08 TPM:8.09
1014 A_BomoN4EE_TR100574_c0_g2_i1
555bp
FPKM:1.28 TPM:1.71
1015 A_BomoN4EE_TR100575_c0_g1_i1
2476bp
 protein_O-fucosyltransferase_2_precursor_[Bombyx_mori]
GO:0001707 P mesoderm formation
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0006004 P fucose metabolic process
GO:0006486 P protein glycosylation
GO:0008417 F fucosyltransferase activity
GO:0010468 P regulation of gene expression
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0036065 P fucosylation
GO:0036066 P protein O-linked fucosylation
GO:0046922 F peptide-O-fucosyltransferase activity
GO:0051046 P regulation of secretion
FPKM:6.01 TPM:8.01
1016 A_BomoN4EE_TR100576_c0_g1_i1
708bp
 PREDICTED:_uncharacterized_protein_LOC105381504_[Plutella_xylostella]
FPKM:1.58 TPM:2.10
1017 A_BomoN4EE_TR100576_c0_g2_i1
1237bp
FPKM:2.42 TPM:3.22
1018 A_BomoN4EE_TR100576_c1_g1_i1
3023bp
 PREDICTED:_UDP-N-acetylglucosamine_transporter_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005351 F carbohydrate:proton symporter activity
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015788 P UDP-N-acetylglucosamine transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:19.92 TPM:26.54
1019 A_BomoN4EE_TR100577_c0_g1_i1
4657bp
 hypothetical_protein_KGM_10034_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
FPKM:5.94 TPM:7.91
1020 A_BomoN4EE_TR100578_c0_g1_i1
260bp
 PREDICTED:_odorant_receptor_4-like_[Bombyx_mori]
FPKM:4.64 TPM:6.18
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