SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/144953
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
691 A_BomoN4EE_TR100401_c0_g1_i2
2733bp
 PREDICTED:_neurofilament_heavy_polypeptide-like_[Bombyx_mori]
FPKM:3.09 TPM:4.12
692 A_BomoN4EE_TR100401_c1_g1_i1
232bp
 PREDICTED:_uncharacterized_protein_LOC105842553_[Bombyx_mori]
FPKM:0.00 TPM:0.00
693 A_BomoN4EE_TR100402_c0_g1_i1
1694bp
FPKM:11.44 TPM:15.24
694 A_BomoN4EE_TR100403_c0_g1_i1
1114bp
 hypothetical_protein,_partial_[Ostrinia_furnacalis]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
FPKM:0.55 TPM:0.73
695 A_BomoN4EE_TR100403_c0_g2_i1
1201bp
 hypothetical_protein,_partial_[Ostrinia_furnacalis]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
FPKM:0.82 TPM:1.09
696 A_BomoN4EE_TR100404_c0_g1_i1
981bp
 PREDICTED:_esterase_FE4-like_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004771 F sterol esterase activity
GO:0004806 F triglyceride lipase activity
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005887 C integral component of plasma membrane
GO:0006629 P lipid metabolic process
GO:0006641 P triglyceride metabolic process
GO:0006707 P cholesterol catabolic process
GO:0007158 P neuron cell-cell adhesion
GO:0007416 P synapse assembly
GO:0008201 F heparin binding
GO:0009062 P fatty acid catabolic process
GO:0009986 C cell surface
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0018350 P protein esterification
GO:0030157 P pancreatic juice secretion
GO:0030299 P intestinal cholesterol absorption
GO:0042043 F neurexin family protein binding
GO:0044241 P lipid digestion
GO:0044258 P intestinal lipid catabolic process
GO:0045202 C synapse
GO:0047372 F acylglycerol lipase activity
GO:0050804 P modulation of chemical synaptic transmission
GO:0052689 F carboxylic ester hydrolase activity
GO:0070062 C extracellular exosome
FPKM:0.36 TPM:0.48
697 A_BomoN4EE_TR100404_c0_g2_i1
1025bp
 PREDICTED:_esterase_FE4-like_isoform_X1_[Bombyx_mori]
FPKM:0.14 TPM:0.19
698 A_BomoN4EE_TR100404_c1_g1_i1
1266bp
 PREDICTED:_esterase_FE4-like_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
FPKM:0.38 TPM:0.50
699 A_BomoN4EE_TR100405_c0_g1_i1
465bp
FPKM:0.32 TPM:0.43
700 A_BomoN4EE_TR100406_c0_g1_i1
333bp
 Mitochondrial_39S_ribosomal_protein_L3_[Danaus_plexippus]
FPKM:3.47 TPM:4.62
701 A_BomoN4EE_TR100407_c0_g1_i1
227bp
 apolipoprotein_N-acyltransferase_[Nocardioides_sp._URHA0020]
FPKM:0.61 TPM:0.81
702 A_BomoN4EE_TR100408_c0_g1_i1
276bp
FPKM:0.98 TPM:1.31
703 A_BomoN4EE_TR100409_c0_g1_i1
344bp
FPKM:0.38 TPM:0.51
704 A_BomoN4EE_TR10040_c0_g1_i1
269bp
 PREDICTED:_exocyst_complex_component_2_isoform_X1_[Balaenoptera_acutorostrata_scammoni]
FPKM:0.00 TPM:0.00
705 A_BomoN4EE_TR100410_c0_g1_i1
404bp
FPKM:0.41 TPM:0.55
706 A_BomoN4EE_TR100411_c0_g1_i1
262bp
FPKM:0.38 TPM:0.51
707 A_BomoN4EE_TR100412_c0_g1_i1
320bp
 PREDICTED:_phospholipid_scramblase_2-like_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017121 P plasma membrane phospholipid scrambling
GO:0017124 F SH3 domain binding
GO:0017128 F phospholipid scramblase activity
GO:0031966 C mitochondrial membrane
GO:0042593 P glucose homeostasis
GO:0042632 P cholesterol homeostasis
GO:0048306 F calcium-dependent protein binding
GO:0071222 P cellular response to lipopolysaccharide
FPKM:0.00 TPM:0.00
708 A_BomoN4EE_TR100413_c0_g1_i1
566bp
 olfactory_receptor_[Bombyx_mori]
FPKM:0.31 TPM:0.41
709 A_BomoN4EE_TR100414_c0_g1_i1
258bp
 hypothetical_protein_SPAPADRAFT_135246_[Spathaspora_passalidarum_NRRL_Y-27907]
FPKM:0.00 TPM:0.00
710 A_BomoN4EE_TR100415_c0_g1_i1
286bp
 Flp_pilus_assembly_protein_CpaB_[Streptomyces_sp._NRRL_F-5126]
FPKM:2.08 TPM:2.76
711 A_BomoN4EE_TR100416_c0_g1_i1
301bp
 olfactory_receptor_[Bombyx_mori]
FPKM:0.52 TPM:0.69
712 A_BomoN4EE_TR100417_c0_g1_i1
390bp
FPKM:0.00 TPM:0.00
713 A_BomoN4EE_TR100418_c0_g1_i1
301bp
 pyridoxamine_5'-phosphate_oxidase_[Blastopirellula_marina]
FPKM:9.61 TPM:12.80
714 A_BomoN4EE_TR100419_c0_g1_i1
401bp
FPKM:0.56 TPM:0.74
715 A_BomoN4EE_TR10041_c0_g1_i1
786bp
 4-diphosphocytidyl-2C-methyl-D-erythritol_synthase_[Sphingopyxis_macrogoltabida]
FPKM:0.59 TPM:0.78
716 A_BomoN4EE_TR100420_c0_g1_i1
320bp
 hypothetical_protein_OCBIM_22033686mg,_partial_[Octopus_bimaculoides]
FPKM:0.89 TPM:1.19
717 A_BomoN4EE_TR100421_c0_g1_i1
533bp
FPKM:0.51 TPM:0.68
718 A_BomoN4EE_TR100422_c0_g1_i1
254bp
 hypothetical_protein_[Kosakonia_radicincitans]
FPKM:0.42 TPM:0.56
719 A_BomoN4EE_TR100423_c0_g1_i1
516bp
FPKM:0.36 TPM:0.48
720 A_BomoN4EE_TR100424_c0_g1_i1
281bp
FPKM:1.24 TPM:1.66
previous next from show/144953

- SilkBase 1999-2023 -