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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
331 A_BomoN4EE_TR100174_c0_g1_i1
347bp
 PREDICTED:_uncharacterized_protein_LOC105842555_[Bombyx_mori]
FPKM:0.00 TPM:0.00
332 A_BomoN4EE_TR100174_c0_g2_i1
251bp
 uncharacterized_protein_Dvir_GJ21944_[Drosophila_virilis]
FPKM:0.59 TPM:0.78
333 A_BomoN4EE_TR100174_c0_g3_i1
294bp
FPKM:0.18 TPM:0.24
334 A_BomoN4EE_TR100175_c0_g1_i1
1175bp
 PREDICTED:_nucleolar_complex_protein_3_homolog_[Bombyx_mori]
FPKM:3.78 TPM:5.03
335 A_BomoN4EE_TR100175_c0_g2_i1
1176bp
 PREDICTED:_nucleolar_complex_protein_3_homolog_[Bombyx_mori]
FPKM:0.00 TPM:0.00
336 A_BomoN4EE_TR100176_c0_g1_i1
247bp
 hypothetical_protein,_partial_[Nocardiopsis_lucentensis]
FPKM:0.46 TPM:0.61
337 A_BomoN4EE_TR100177_c0_g1_i1
2065bp
FPKM:0.37 TPM:0.50
338 A_BomoN4EE_TR100178_c0_g1_i1
507bp
 hypothetical_protein_[Paramecium_tetraurelia_strain_d4-2]
FPKM:0.00 TPM:0.00
339 A_BomoN4EE_TR100178_c0_g2_i1
506bp
 hypothetical_protein_[Paramecium_tetraurelia_strain_d4-2]
FPKM:0.65 TPM:0.86
340 A_BomoN4EE_TR100179_c0_g1_i1
256bp
 hypothetical_protein_RR48_14303_[Papilio_machaon]
FPKM:0.81 TPM:1.08
341 A_BomoN4EE_TR10017_c0_g1_i1
318bp
FPKM:0.68 TPM:0.91
342 A_BomoN4EE_TR100180_c0_g1_i1
247bp
 CDP-glucose_4,6-dehydratase_[Intestinimonas_butyriciproducens]
FPKM:0.58 TPM:0.77
343 A_BomoN4EE_TR100180_c0_g2_i1
682bp
 synaptobrevin_[Bombyx_mori]
FPKM:2.77 TPM:3.69
344 A_BomoN4EE_TR100181_c0_g1_i1
434bp
 CRISPR-associated_helicase/endonuclease_Cas3_[Thermodesulfovibrio_thiophilus]
FPKM:3.24 TPM:4.32
345 A_BomoN4EE_TR100182_c0_g1_i1
290bp
 PREDICTED:_pseudouridine-metabolizing_bifunctional_protein_C1861.05_isoform_X3_[Bombyx_mori]
FPKM:0.86 TPM:1.14
346 A_BomoN4EE_TR100183_c0_g1_i1
306bp
 PREDICTED:_uncharacterized_protein_LOC103579195_[Microplitis_demolitor]
FPKM:1.00 TPM:1.33
347 A_BomoN4EE_TR100184_c0_g1_i1
328bp
 PREDICTED:_uncharacterized_protein_LOC105843669_[Hydra_vulgaris]
FPKM:1.27 TPM:1.69
348 A_BomoN4EE_TR100185_c0_g1_i1
1205bp
 PREDICTED:_N-glycosylase/DNA_lyase_isoform_X1_[Amyelois_transitella]
GO:0003684 F damaged DNA binding
GO:0003824 F catalytic activity
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008534 F oxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016829 F lyase activity
GO:0019104 F DNA N-glycosylase activity
GO:0034599 P cellular response to oxidative stress
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:25.64 TPM:34.16
349 A_BomoN4EE_TR100185_c0_g2_i1
1143bp
 PREDICTED:_N-glycosylase/DNA_lyase_isoform_X1_[Amyelois_transitella]
GO:0003684 F damaged DNA binding
GO:0003824 F catalytic activity
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008534 F oxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016829 F lyase activity
GO:0019104 F DNA N-glycosylase activity
GO:0034599 P cellular response to oxidative stress
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:6.00 TPM:8.00
350 A_BomoN4EE_TR100186_c0_g1_i1
998bp
 putative_SERF-like_protein_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0008150 P biological_process
FPKM:152.20 TPM:202.73
351 A_BomoN4EE_TR100187_c0_g1_i1
294bp
FPKM:0.55 TPM:0.73
352 A_BomoN4EE_TR100188_c0_g1_i1
659bp
 PREDICTED:_ATP-binding_cassette_sub-family_A_member_3-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005319 F lipid transporter activity
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0044267 P cellular protein metabolic process
GO:0051384 P response to glucocorticoid
GO:0055085 P transmembrane transport
GO:0097208 C alveolar lamellar body
GO:0097232 C lamellar body membrane
GO:0097233 C alveolar lamellar body membrane
FPKM:8.33 TPM:11.10
353 A_BomoN4EE_TR100189_c0_g1_i1
1183bp
FPKM:0.26 TPM:0.34
354 A_BomoN4EE_TR100189_c0_g2_i1
1182bp
FPKM:1.56 TPM:2.08
355 A_BomoN4EE_TR10018_c0_g1_i1
278bp
FPKM:0.00 TPM:0.00
356 A_BomoN4EE_TR100190_c0_g1_i1
456bp
FPKM:0.11 TPM:0.15
357 A_BomoN4EE_TR100190_c1_g1_i1
246bp
FPKM:0.46 TPM:0.62
358 A_BomoN4EE_TR100191_c0_g1_i1
251bp
 PREDICTED:_twinkle_protein,_mitochondrial_[Amyelois_transitella]
FPKM:0.00 TPM:0.00
359 A_BomoN4EE_TR100191_c0_g2_i1
251bp
 PREDICTED:_twinkle_protein,_mitochondrial_[Amyelois_transitella]
FPKM:0.00 TPM:0.00
360 A_BomoN4EE_TR100192_c0_g1_i1
253bp
 hypothetical_protein_[Nocardia_sp._348MFTsu5.1]
FPKM:0.00 TPM:0.00
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