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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
301 A_BomoN4EE_TR100157_c0_g1_i1
3505bp
 eukaryotic_translation_initiation_factor_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003743 F translation initiation factor activity
GO:0005525 F GTP binding
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0022008 P neurogenesis
FPKM:84.79 TPM:112.94
302 A_BomoN4EE_TR100157_c0_g2_i1
3506bp
 eukaryotic_translation_initiation_factor_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003743 F translation initiation factor activity
GO:0005525 F GTP binding
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0022008 P neurogenesis
FPKM:8.09 TPM:10.77
303 A_BomoN4EE_TR100158_c0_g1_i1
2509bp
 PREDICTED:_DNA_replication_factor_Cdt1_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0007049 P cell cycle
FPKM:29.45 TPM:39.23
304 A_BomoN4EE_TR100159_c0_g1_i1
864bp
FPKM:1.08 TPM:1.44
305 A_BomoN4EE_TR100159_c0_g2_i1
732bp
FPKM:0.00 TPM:0.00
306 A_BomoN4EE_TR10015_c0_g1_i1
297bp
FPKM:0.81 TPM:1.07
307 A_BomoN4EE_TR100160_c0_g1_i1
3522bp
 putative_VPS9-ankyrin_repeat-containing_protein_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0042470 C melanosome
FPKM:0.42 TPM:0.56
308 A_BomoN4EE_TR100160_c0_g2_i1
3521bp
 putative_VPS9-ankyrin_repeat-containing_protein_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0042470 C melanosome
FPKM:20.90 TPM:27.84
309 A_BomoN4EE_TR100161_c0_g1_i1
1667bp
 chorion_class_A_[Bombyx_mori]
FPKM:0.81 TPM:1.07
310 A_BomoN4EE_TR100162_c0_g1_i1
240bp
 drug/metabolite_exporter_YedA_[Luteimonas_sp._FCS-9]
FPKM:0.00 TPM:0.00
311 A_BomoN4EE_TR100163_c0_g1_i1
4006bp
 PREDICTED:_uncharacterized_protein_LOC101744704_isoform_X1_[Bombyx_mori]
FPKM:1.63 TPM:2.18
312 A_BomoN4EE_TR100163_c0_g2_i1
4005bp
 PREDICTED:_uncharacterized_protein_LOC101744704_isoform_X1_[Bombyx_mori]
FPKM:16.74 TPM:22.30
313 A_BomoN4EE_TR100164_c0_g1_i1
1100bp
 PREDICTED:_28S_ribosomal_protein_S17,_mitochondrial-like_[Papilio_machaon]
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
FPKM:88.26 TPM:117.57
314 A_BomoN4EE_TR100164_c0_g2_i1
1101bp
 PREDICTED:_28S_ribosomal_protein_S17,_mitochondrial-like_[Papilio_machaon]
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
FPKM:7.67 TPM:10.22
315 A_BomoN4EE_TR100165_c0_g1_i1
1104bp
 olfactory_receptor_[Bombyx_mori]
FPKM:0.00 TPM:0.00
316 A_BomoN4EE_TR100165_c0_g2_i1
1103bp
 olfactory_receptor_[Bombyx_mori]
FPKM:0.89 TPM:1.19
317 A_BomoN4EE_TR100166_c0_g1_i1
253bp
 olfactory_receptor_[Bombyx_mori]
FPKM:0.00 TPM:0.00
318 A_BomoN4EE_TR100166_c0_g2_i1
241bp
 olfactory_receptor_[Bombyx_mori]
FPKM:0.49 TPM:0.66
319 A_BomoN4EE_TR100167_c0_g1_i1
239bp
 hypothetical_protein_OCBIM_22005285mg,_partial_[Octopus_bimaculoides]
FPKM:1.52 TPM:2.03
320 A_BomoN4EE_TR100167_c0_g2_i1
240bp
FPKM:0.00 TPM:0.00
321 A_BomoN4EE_TR100168_c0_g1_i1
418bp
 PREDICTED:_uncharacterized_protein_LOC101743420_[Bombyx_mori]
FPKM:0.90 TPM:1.19
322 A_BomoN4EE_TR100169_c0_g1_i1
1426bp
FPKM:8.99 TPM:11.98
323 A_BomoN4EE_TR10016_c0_g1_i1
369bp
FPKM:0.33 TPM:0.44
324 A_BomoN4EE_TR100170_c0_g1_i1
490bp
FPKM:3.71 TPM:4.94
325 A_BomoN4EE_TR100171_c0_g1_i1
1028bp
 serine_protease_inhibitor_33_precursor_[Bombyx_mori]
FPKM:10.72 TPM:14.27
326 A_BomoN4EE_TR100171_c0_g2_i1
1029bp
 serine_protease_inhibitor_33_precursor_[Bombyx_mori]
FPKM:0.13 TPM:0.18
327 A_BomoN4EE_TR100172_c0_g1_i1
485bp
FPKM:0.20 TPM:0.26
328 A_BomoN4EE_TR100172_c1_g1_i1
710bp
FPKM:0.39 TPM:0.52
329 A_BomoN4EE_TR100173_c0_g1_i1
1297bp
FPKM:14.62 TPM:19.48
330 A_BomoN4EE_TR100173_c0_g2_i1
648bp
FPKM:7.09 TPM:9.45
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