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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
241 A_BomoN4EE_TR100128_c0_g1_i1
2593bp
 PREDICTED:_uncharacterized_protein_LOC106131303_isoform_X1_[Amyelois_transitella]
FPKM:2.49 TPM:3.31
242 A_BomoN4EE_TR100129_c0_g1_i1
227bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
243 A_BomoN4EE_TR100129_c0_g2_i1
239bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
244 A_BomoN4EE_TR10012_c0_g1_i1
317bp
 PREDICTED:_uncharacterized_protein_LOC101737620_isoform_X1_[Bombyx_mori]
FPKM:1.60 TPM:2.13
245 A_BomoN4EE_TR100130_c0_g1_i1
261bp
FPKM:1.84 TPM:2.46
246 A_BomoN4EE_TR100130_c0_g2_i1
739bp
FPKM:0.85 TPM:1.13
247 A_BomoN4EE_TR100130_c0_g3_i1
262bp
FPKM:0.45 TPM:0.61
248 A_BomoN4EE_TR100130_c1_g1_i1
304bp
FPKM:0.76 TPM:1.01
249 A_BomoN4EE_TR100131_c0_g1_i1
2776bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_CYLD_isoform_X1_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005881 C cytoplasmic microtubule
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030496 C midbody
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0036064 C ciliary basal body
GO:0036459 F thiol-dependent deubiquitinase
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0070536 P protein K63-linked deubiquitination
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
FPKM:4.10 TPM:5.46
250 A_BomoN4EE_TR100131_c0_g1_i2
1861bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_CYLD_isoform_X3_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005881 C cytoplasmic microtubule
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030496 C midbody
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0036064 C ciliary basal body
GO:0036459 F thiol-dependent deubiquitinase
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0070536 P protein K63-linked deubiquitination
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
FPKM:6.21 TPM:8.27
251 A_BomoN4EE_TR100131_c0_g1_i3
2857bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_CYLD_isoform_X1_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005881 C cytoplasmic microtubule
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0007346 P regulation of mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0010803 P regulation of tumor necrosis factor-mediated signaling pathway
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0019901 F protein kinase binding
GO:0030496 C midbody
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0032480 P negative regulation of type I interferon production
GO:0036064 C ciliary basal body
GO:0036459 F thiol-dependent deubiquitinase
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0042995 C cell projection
GO:0045581 P negative regulation of T cell differentiation
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0061578 F Lys63-specific deubiquitinase activity
GO:0070064 F proline-rich region binding
GO:0070266 P necroptotic process
GO:0070423 P nucleotide-binding oligomerization domain containing signaling pathway
GO:0070507 P regulation of microtubule cytoskeleton organization
GO:0070536 P protein K63-linked deubiquitination
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0097542 C ciliary tip
GO:1901026 P ripoptosome assembly involved in necroptotic process
GO:1902017 P regulation of cilium assembly
GO:2001238 P positive regulation of extrinsic apoptotic signaling pathway
GO:2001242 P regulation of intrinsic apoptotic signaling pathway
FPKM:3.54 TPM:4.72
252 A_BomoN4EE_TR100131_c0_g1_i4
2355bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_CYLD_isoform_X1_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005881 C cytoplasmic microtubule
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0007346 P regulation of mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0010803 P regulation of tumor necrosis factor-mediated signaling pathway
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0019901 F protein kinase binding
GO:0030496 C midbody
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0032480 P negative regulation of type I interferon production
GO:0036064 C ciliary basal body
GO:0036459 F thiol-dependent deubiquitinase
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0042995 C cell projection
GO:0045581 P negative regulation of T cell differentiation
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0061578 F Lys63-specific deubiquitinase activity
GO:0070064 F proline-rich region binding
GO:0070266 P necroptotic process
GO:0070423 P nucleotide-binding oligomerization domain containing signaling pathway
GO:0070507 P regulation of microtubule cytoskeleton organization
GO:0070536 P protein K63-linked deubiquitination
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0097542 C ciliary tip
GO:1901026 P ripoptosome assembly involved in necroptotic process
GO:1902017 P regulation of cilium assembly
GO:2001238 P positive regulation of extrinsic apoptotic signaling pathway
GO:2001242 P regulation of intrinsic apoptotic signaling pathway
FPKM:11.20 TPM:14.92
253 A_BomoN4EE_TR100132_c0_g1_i1
2288bp
 FATP_[Manduca_sexta]
GO:0000166 F nucleotide binding
GO:0001579 P medium-chain fatty acid transport
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006659 P phosphatidylserine biosynthetic process
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0009409 P response to cold
GO:0012505 C endomembrane system
GO:0015245 F fatty acid transmembrane transporter activity
GO:0015908 P fatty acid transport
GO:0015909 P long-chain fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0031652 P positive regulation of heat generation
GO:0031957 F very long-chain fatty acid-CoA ligase activity
GO:0032049 P cardiolipin biosynthetic process
GO:0032868 P response to insulin
GO:0033211 P adiponectin-activated signaling pathway
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0071072 P negative regulation of phospholipid biosynthetic process
GO:0071902 P positive regulation of protein serine/threonine kinase activity
FPKM:13.99 TPM:18.64
254 A_BomoN4EE_TR100132_c0_g2_i1
341bp
 Uncharacterized_protein_OBRU01_22960_[Operophtera_brumata]
GO:0000038 P very long-chain fatty acid metabolic process
GO:0000166 F nucleotide binding
GO:0001579 P medium-chain fatty acid transport
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0005902 C microvillus
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0015908 P fatty acid transport
GO:0015909 P long-chain fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0031526 C brush border membrane
GO:0031957 F very long-chain fatty acid-CoA ligase activity
GO:0042760 P very long-chain fatty acid catabolic process
GO:0043588 P skin development
GO:0044539 P long-chain fatty acid import into cell
FPKM:0.00 TPM:0.00
255 A_BomoN4EE_TR100133_c0_g1_i1
257bp
FPKM:0.80 TPM:1.07
256 A_BomoN4EE_TR100133_c1_g1_i1
874bp
 vomeronasal_1_receptor,_partial_[Microcebus_murinus]
FPKM:0.47 TPM:0.62
257 A_BomoN4EE_TR100134_c0_g1_i1
881bp
 Beta-sarcoglycan_[Papilio_machaon]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016011 C dystroglycan complex
GO:0016012 C sarcoglycan complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042383 C sarcolemma
GO:0048747 P muscle cell development
GO:0055013 P cardiac muscle cell development
GO:0097084 P vascular associated smooth muscle cell development
FPKM:5.52 TPM:7.35
258 A_BomoN4EE_TR100135_c0_g1_i1
695bp
 PREDICTED:_ankyrin_repeat_and_LEM_domain-containing_protein_2_[Papilio_machaon]
FPKM:13.01 TPM:17.33
259 A_BomoN4EE_TR100135_c0_g2_i1
696bp
 PREDICTED:_ankyrin_repeat_and_LEM_domain-containing_protein_2_[Papilio_machaon]
FPKM:3.15 TPM:4.19
260 A_BomoN4EE_TR100136_c0_g1_i1
266bp
 L302_BOMMO_RecName:_Full=Low_molecular_mass_30_kDa_lipoprotein_21G1;_Flags:_Precursor_[Bombyx_mori]
GO:0005576 C extracellular region
FPKM:0.73 TPM:0.97
261 A_BomoN4EE_TR100137_c0_g1_i1
969bp
 PREDICTED:_molybdenum_cofactor_biosynthesis_protein_1_[Bombyx_mori]
FPKM:1.98 TPM:2.64
262 A_BomoN4EE_TR100138_c0_g1_i1
633bp
FPKM:0.00 TPM:0.00
263 A_BomoN4EE_TR100138_c0_g2_i1
632bp
FPKM:0.26 TPM:0.35
264 A_BomoN4EE_TR100139_c0_g1_i1
8794bp
 PREDICTED:_uncharacterized_protein_LOC101744971_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.28 TPM:1.71
265 A_BomoN4EE_TR100139_c0_g2_i1
8793bp
 PREDICTED:_uncharacterized_protein_LOC101744971_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:22.65 TPM:30.17
266 A_BomoN4EE_TR10013_c0_g1_i1
271bp
FPKM:0.69 TPM:0.92
267 A_BomoN4EE_TR100140_c0_g1_i1
2479bp
 adiponectin_receptor_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0009755 P hormone-mediated signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019395 P fatty acid oxidation
GO:0032024 P positive regulation of insulin secretion
GO:0033211 P adiponectin-activated signaling pathway
GO:0036099 P female germ-line stem cell population maintenance
GO:0042562 F hormone binding
GO:0042593 P glucose homeostasis
GO:0046872 F metal ion binding
GO:0070328 P triglyceride homeostasis
GO:0097003 F adipokinetic hormone receptor activity
FPKM:2.40 TPM:3.20
268 A_BomoN4EE_TR100140_c0_g2_i1
2478bp
 ADIPOR-like_receptor_[Operophtera_brumata]
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0009755 P hormone-mediated signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019395 P fatty acid oxidation
GO:0032024 P positive regulation of insulin secretion
GO:0033211 P adiponectin-activated signaling pathway
GO:0036099 P female germ-line stem cell population maintenance
GO:0042562 F hormone binding
GO:0042593 P glucose homeostasis
GO:0046872 F metal ion binding
GO:0070328 P triglyceride homeostasis
GO:0097003 F adipokinetic hormone receptor activity
FPKM:22.11 TPM:29.45
269 A_BomoN4EE_TR100141_c0_g1_i1
547bp
FPKM:2.95 TPM:3.92
270 A_BomoN4EE_TR100141_c0_g2_i1
548bp
FPKM:0.00 TPM:0.00
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