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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100131_c0_g1_i2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_CYLD_isoform_X3_[Bombyx_mori]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005881 C cytoplasmic microtubule
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030496 C midbody
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0036064 C ciliary basal body
GO:0036459 F thiol-dependent deubiquitinase
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0070536 P protein K63-linked deubiquitination
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
Transcript
Level		FPKM:6.21 TPM:8.27
ORF EntryO_BomoN4EE50775_complete:A_BomoN4EE_TR100131_c0_g1_i2
Sequence
(Nucleotide)
CACATCTCGGCGTCATAGCGCGCCGTCAGTTTAGCGTTCTGAGGCGCGCTAGTACGCGTT
CTGTTTGACGAAGCCTTAAAAGTACACAACTACGGGCAGACACTGCAACCGCGGGTGTCG
AGCTGGAGGAGAGCGTGTGCGGCCTGGGGGACGGCAGCCGCGGCGGCGTGCAACTGTTCG
AGTGCGCGCCGGGGAGGGCACTGTTCGTGCCGCTGCCGCTGTGTCGCCGCGACGCACGCT
TCCGCGACACGCCCCCGCCCGACAGACCCGACCTCCACCATGTTCAACTTAGCGAACAGC
CAGAGTGTCCTGTAGTACCAGGCGTGATCCCACCGCTTACTTCCTTGGGGGACCTAGCAG
GGAAAAACAGGGGTATTCAAGGTCATCACAATTCTTGTTATCTCGACGCAACGCTGTTCG
CTATGTTCACCTTCACAAGCGTGTTCGACGCGTTGTTGTACAGGCCACCGGAACCAGAGG
ATTCACCGCATTATTCGGAAGTGCAGCGTGTACTGCGCGAAGAAATCGTGAACCCGCTCC
GTAAGCACGGGTACGTCCGCGCCGACAGGGTTATGAAACTGCGCACGCTACTCGAACGAC
TTTCCGATGTGCCGGGACTCACTTCTGAAGAAAAGGATCCGGAAGAGTTCTTGAACGGCT
TAGTGGCACAGATCTTACGGGCCGAACCTTTTCTCAAATTATCATCAGGTCAAGAAGCGT
TCTGCTATCAGCTCTTTGTCGAAAAGGATGAACACGTCTCCCTGCCGACGGTGCAGCAAC
TGCTCGAACAGTCGTTTGCTACTTCGGGTGTCAAACTCAGCGAGGTCCCCGCCGCTTTCA
TAATCCAAATGCCGAGGTTCGGGAAACAATACAAACTGTATCAGCGTGTAATGCCATCGC
CGTTATTGGACGTCACTGATCTCATTGAAGGACTTCCGCGGCAGTGCGCTGTGTGCGGCG
GGCTGGCGCGCTGGGAGTGTGCGGAGTGCGCCCGCGGCGCCGCGCTCGACGCCGCCGCGC
TCTGCCGCGCCTGTTTGCGGCGCGCGCACTCGACACGCCAGCACAAGGCAACGCCACTGA
CGGTATTCGAAGAGTACTCCAGTATACTCGAGTCATGTCCCGTCCCGCGCGTGTACATGG
AACTGTTCGCGGTGCTCTGCATTGAGACCAGTCATTACGTGGCCTTCGTGAAAGCCGGCG
TCGGTCACGATGCACCGTGGTGCTTCTTCGATTCCATGGCCGACAGAAAAGGCGAGCGCG
ACGGGTACAACATCCCGGAGATCGTGAGTATGAAGGAGGTAGGCGCGTGGCTGAGCGAGG
CGGACCCCGCGCCCCGCGCGCCGCCCCTCGCGCGCCGCCTGCTCGCCGATGCCTACATGT
GTTTCTACCGCAGCCCCGACGTCGCCATGTATCGCTGACTGTACGCCGACTCCATACTTC
TCTCGCTCAACGGTCGCTTCAACCCAAACCCATAGTCTATTTGGACGTGGCTGAAATATG
AAATGAAGAAAACGGATGGTTTCTTCTTCCTATCCTTATTCTACATTATGTGAGGTCCGC
GCAGCGAATCCTCTTATCATGCGTCAAACGGCTGGTTCCCATTTTTTTAATTACGAAACT
ATAAAACGCTATTGAACGGTATTCATTAAATGTGACGTCATTTGGGGTTAAAATAAACTA
TTTCAAAGGTATGACTTCATGTGCTGTGATTGATGTGTTTTTATGTAGTGATTTAAAATT
AAAATAAGAAAACGCTGCGCGTGCAACTTGGTGTACGTGAATGAAGTGATAATTCTTTTT
CGATGTGTAGTATTGTGGTCTTCTTCATTTTTCATCCTTCAATTAATTAAAGTAATTGGA
G
(1861 bp)

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