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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1141 A_BomoN4EE_TR100672_c0_g1_i1
693bp
FPKM:0.35 TPM:0.46
1142 A_BomoN4EE_TR100673_c0_g1_i1
436bp
FPKM:27.51 TPM:36.64
1143 A_BomoN4EE_TR100674_c0_g1_i1
1176bp
 B-box_type_zinc_finger_protein_ncl-1_[Papilio_xuthus]
FPKM:0.97 TPM:1.30
1144 A_BomoN4EE_TR100675_c0_g1_i1
283bp
FPKM:0.00 TPM:0.00
1145 A_BomoN4EE_TR100676_c0_g1_i1
422bp
 unknown_[Bombyx_mori]
FPKM:0.28 TPM:0.37
1146 A_BomoN4EE_TR100676_c0_g2_i1
421bp
 unknown_[Bombyx_mori]
FPKM:0.86 TPM:1.14
1147 A_BomoN4EE_TR100677_c0_g1_i1
447bp
 LOW_QUALITY_PROTEIN:_GTP-binding_protein_Obg_[Geomicrobium_sp._JCM_19055]
FPKM:0.34 TPM:0.46
1148 A_BomoN4EE_TR100678_c0_g1_i1
502bp
FPKM:0.37 TPM:0.50
1149 A_BomoN4EE_TR100679_c0_g1_i1
443bp
FPKM:0.12 TPM:0.15
1150 A_BomoN4EE_TR10067_c0_g1_i1
363bp
FPKM:0.51 TPM:0.68
1151 A_BomoN4EE_TR100680_c0_g1_i1
325bp
FPKM:0.43 TPM:0.57
1152 A_BomoN4EE_TR100681_c0_g1_i1
539bp
FPKM:3.60 TPM:4.80
1153 A_BomoN4EE_TR100682_c0_g1_i1
1075bp
 PREDICTED:_uncharacterized_protein_LOC101731991_[Xenopus_tropicalis]
FPKM:15.38 TPM:20.49
1154 A_BomoN4EE_TR100683_c0_g1_i1
510bp
FPKM:1.37 TPM:1.83
1155 A_BomoN4EE_TR100684_c0_g1_i1
1227bp
FPKM:1.43 TPM:1.90
1156 A_BomoN4EE_TR100685_c0_g1_i1
303bp
FPKM:0.26 TPM:0.34
1157 A_BomoN4EE_TR100686_c1_g1_i1
334bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:1.42 TPM:1.89
1158 A_BomoN4EE_TR100687_c0_g1_i1
829bp
FPKM:1.78 TPM:2.37
1159 A_BomoN4EE_TR100687_c0_g2_i1
830bp
FPKM:0.00 TPM:0.00
1160 A_BomoN4EE_TR100687_c0_g3_i1
392bp
FPKM:2.03 TPM:2.71
1161 A_BomoN4EE_TR100688_c0_g1_i1
271bp
 iron_ABC_transporter_permease_[Pantoea_anthophila]
FPKM:0.34 TPM:0.46
1162 A_BomoN4EE_TR100688_c1_g1_i1
319bp
 hypothetical_protein_[Psychromonas_arctica]
FPKM:0.90 TPM:1.20
1163 A_BomoN4EE_TR100689_c0_g1_i1
656bp
 uncharacterized_protein_BN535_03006_[Bacteroides_caccae_CAG:21]
FPKM:2.00 TPM:2.67
1164 A_BomoN4EE_TR10068_c0_g1_i1
484bp
FPKM:0.20 TPM:0.27
1165 A_BomoN4EE_TR100690_c0_g1_i1
658bp
FPKM:0.00 TPM:0.00
1166 A_BomoN4EE_TR100690_c0_g2_i1
618bp
FPKM:2.93 TPM:3.91
1167 A_BomoN4EE_TR100691_c0_g1_i1
238bp
FPKM:0.00 TPM:0.00
1168 A_BomoN4EE_TR100692_c0_g1_i1
1865bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX28_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0019843 F rRNA binding
GO:0035770 C ribonucleoprotein granule
GO:0042254 P ribosome biogenesis
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:1902775 P mitochondrial large ribosomal subunit assembly
FPKM:15.48 TPM:20.62
1169 A_BomoN4EE_TR100693_c0_g1_i1
287bp
 Endoplasmic_reticulum-Golgi_intermediate_compartment_protein_3_[Papilio_machaon]
FPKM:0.90 TPM:1.20
1170 A_BomoN4EE_TR100693_c0_g2_i1
322bp
 ATP_synthase_F0_subunit_8_(mitochondrion)_[Obscurella_hidalgoi]
FPKM:1.31 TPM:1.74
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