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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100692_c0_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX28_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0019843 F rRNA binding
GO:0035770 C ribonucleoprotein granule
GO:0042254 P ribosome biogenesis
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:1902775 P mitochondrial large ribosomal subunit assembly
Transcript
Level		FPKM:15.48 TPM:20.62
ORF EntryO_BomoN4EE51226_complete:A_BomoN4EE_TR100692_c0_g1_i1
Sequence
(Nucleotide)
TACGAAATGTGACATAACCTTAAAATAACAAACAATGCTAGTACATATTTTTAAATTTTA
ATTAAATTGATCAAATAACAGGAACAATGTCTAAATTACGTCAATTAATTAGCACATCCT
ATAGTCGTTATTATAGCCTCCAGCAGGCTAAGAAAAAATTACCTATTATAACATGCAAGC
GACCGGAATTCAATCACTACGAAGGACAGAGTTATAGCAAGTATGAAGGTATAAAACTAG
CTTCGCAGGGATGGCTACACAATAAATCAAAGGGAGACTATTTCATCATACACGGGAATG
CAAATAAAAAAGAAGAAACACCCGTGTATAGGAAGACTTTTGAAGATATCGGCTTGAAAG
ATCATTTGGTTAAAGTTGTCAAAGATTTAGGGTTTACGCTGCCCACGGCCATACAAACAA
AGGCTGTACCCGCCATTCTCAATGGACACAATACGGTAATCACAGCGGAGACGGGCTGCG
GGAAGACCTTAGCGTATTTGTTACCTATAATTCAACATATACTGGAATGGAAGCCAAGCA
TTCAAGAAGAATTTAATAGTCCATTGGCTGTTGTTATTACACCGAACAGAGAACTAGCTC
TACAAATAGGAGAAGTGGCTCAAACAATAGCACAAAGCATAAACATAAATGTCACGACTT
TAATAGGTGGCAAAACGAAAAAAAAAATGTTAAACCCTCCAATTGAGCACAGTGACATAT
TAATCACAACGCTCGGAGCTTACAGTAAACTAGTCACAACTGGAATATACAAGATTCACA
ATGTGCATCATATTGTGCTGGATGAAGCAGATTCCCTTTTGGATGACACATTTATTGATA
AAGTCACATATCTGTTGAAGAAATTTTCGATACAATATAAAGTTGATATTCAAGTCCCTC
CCACAGGTTGTCAGTTGTCTTTAGTTAGTGCAACACTACCTAGGGACCTTCCGGAAACTG
TCAATAATTTTGTAGCGGCTGAATCACTGAAAATGGTTAGAACTTCTAATATACATCGGA
TATTACCACATGTGCCGCAGAAATTCTTACGTCTCGGGAAGGCGCACAAGCCCGCGGAAC
TCCTCAAACTTGTCCAAGCGGATCAGAACGAGAGGAGACCGGTGATGATCTTCAGCAATC
AGACGTCTGGCTGCGACTTCGTGTCTATGTTCCTGAACGAGAACAACGTTGAATGCATCA
ACATCAACGGCCAGATGCCGGTACAGCTGAAGTTGGGGAAGTTTGAAATGTTCAGATCCG
GGAAAGTTAATGTCATTTCGTGTACTGATATCGTTTCCCGAGGATTGGACACTACTAGGA
CGCACCACGTAATTAATTACGATTTCCCTCTGCACACGTCTGACTACATCCACCGGTGCG
GGCGCGCGGGCCGGCTGGGATCCCCGCCCGGATCCCACGTCACCAGCTTCGTGGCCTGGC
CCCGCGAGGTCGAGCTGGTCCAGAAGATCGAGACCTCGGTCAGGACGAACTCTGACCTGC
CCCATGTTAACGCCAACATCAAGCGGGTCATACGAGACAGGATTGTCAGGATGAGCGGGG
CTCTTGCTAAGGCAAGTTGAGGAGCCGGTGTTGCCAGCCGCCGTCGTATCGACCGGCGGC
GTATAAAAAACTTTAACTAGAAAGTTATAGGTGGATCGGATGGAGATTTAAGCATTTTCA
AAACACAATTAGTTACATTCAATTCTATAGAAGTTTAGGTGATGTTTTATCGTATTGCAG
TCACCTATTAAGGAGTGTGTAGAATAATTTTTTTATTGCTTAGATGGGTGGACGAGCTCA
CAGTCCACCTGTTGTTAAAGTTTTTTTTTTTTGCCGTATATGCTGACGAGCATACGTCCC
ACCTG
(1865 bp)

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