SearchView

Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

A_TrvaMG_comp1018_c0_seq1

217bp

PREDICTED:_DNA_repair_protein_RAD51_homolog_3-like_[Papilio_machaon]

GO:0000150	F	DNA strand exchange activity
GO:0000166	F	nucleotide binding
GO:0000400	F	four-way junction DNA binding
GO:0000722	P	telomere maintenance via recombination
GO:0000724	P	double-strand break repair via homologous recombination
GO:0000730	P	DNA recombinase assembly
GO:0000731	P	DNA synthesis involved in DNA repair
GO:0000732	P	strand displacement
GO:0000794	C	condensed nuclear chromosome
GO:0003677	F	DNA binding
GO:0003690	F	double-stranded DNA binding
GO:0003697	F	single-stranded DNA binding
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005657	C	replication fork
GO:0005737	C	cytoplasm
GO:0005739	C	mitochondrion
GO:0006281	P	DNA repair
GO:0006310	P	DNA recombination
GO:0006312	P	mitotic recombination
GO:0006974	P	cellular response to DNA damage stimulus
GO:0007062	P	sister chromatid cohesion
GO:0007066	P	female meiosis sister chromatid cohesion
GO:0007131	P	reciprocal meiotic recombination
GO:0007141	P	male meiosis I
GO:0007283	P	spermatogenesis
GO:0007596	P	blood coagulation
GO:0008094	F	ATP-dependent activity, acting on DNA
GO:0008821	F	crossover junction endodeoxyribonuclease activity
GO:0010212	P	response to ionizing radiation
GO:0010971	P	positive regulation of G2/M transition of mitotic cell cycle
GO:0033063	C	Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0033065	C	Rad51C-XRCC3 complex
GO:0042148	P	strand invasion
GO:0048471	C	perinuclear region of cytoplasm
GO:0048476	C	Holliday junction resolvase complex
GO:0070192	P	chromosome organization involved in meiotic cell cycle

FPKM:1.43 TPM:1.20

A_TrvaMG_comp1019095_c0_seq1

244bp

PREDICTED:_uncharacterized_protein_LOC106130656_[Amyelois_transitella]

FPKM:1.36 TPM:1.14

A_TrvaMG_comp1019182_c0_seq1

220bp

FPKM:1.82 TPM:1.53

A_TrvaMG_comp1019234_c0_seq1

212bp

FPKM:1.03 TPM:0.86

A_TrvaMG_comp101929_c0_seq1

862bp

hypothetical_protein_KGM_19277_[Danaus_plexippus]

GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007275	P	multicellular organism development
GO:0032783	C	super elongation complex
GO:0045893	P	positive regulation of transcription, DNA-templated

FPKM:11.20 TPM:9.43

A_TrvaMG_comp1019601_c0_seq1

215bp

endonuclease-reverse_transcriptase_[Bombyx_mori]

FPKM:0.98 TPM:0.82

A_TrvaMG_comp1019654_c0_seq1

278bp

PREDICTED:_zinc_finger_protein_70-like,_partial_[Taeniopygia_guttata]

FPKM:0.99 TPM:0.83

A_TrvaMG_comp1019827_c0_seq1

386bp

PREDICTED:_uncharacterized_protein_LOC106130799_[Amyelois_transitella]

FPKM:0.79 TPM:0.67

A_TrvaMG_comp1020059_c0_seq1

271bp

PREDICTED:_leucine-rich_repeat_extensin-like_protein_5_[Amyelois_transitella]

FPKM:1.05 TPM:0.88

100

A_TrvaMG_comp1020115_c0_seq1

217bp

PREDICTED:_uncharacterized_protein_LOC106125042_[Papilio_xuthus]

FPKM:0.48 TPM:0.40

101

A_TrvaMG_comp102034_c0_seq1

1349bp

FPKM:6.18 TPM:5.20

102

A_TrvaMG_comp1020369_c0_seq1

290bp

FPKM:1.13 TPM:0.95

103

A_TrvaMG_comp1020378_c0_seq1

224bp

FPKM:1.29 TPM:1.09

104

A_TrvaMG_comp1020433_c0_seq1

207bp

PREDICTED:_collectin-11_isoform_X4_[Loxodonta_africana]

FPKM:2.22 TPM:1.87

105

A_TrvaMG_comp1020544_c0_seq1

327bp

PREDICTED:_protein_yellow-like_[Bombyx_mori]

FPKM:0.88 TPM:0.74

106

A_TrvaMG_comp1020815_c0_seq1

215bp

PREDICTED:_serine/threonine-protein_kinase_fused_[Plutella_xylostella]

GO:0000166	F	nucleotide binding
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005737	C	cytoplasm
GO:0005929	C	cilium
GO:0006468	P	protein phosphorylation
GO:0007224	P	smoothened signaling pathway
GO:0007228	P	positive regulation of hh target transcription factor activity
GO:0007275	P	multicellular organism development
GO:0007293	P	germarium-derived egg chamber formation
GO:0007367	P	segment polarity determination
GO:0016020	C	membrane
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0030162	P	regulation of proteolysis
GO:0030514	P	negative regulation of BMP signaling pathway
GO:0031398	P	positive regulation of protein ubiquitination
GO:0031647	P	regulation of protein stability
GO:0035301	C	Hedgehog signaling complex
GO:0042073	P	intraciliary transport
GO:0042993	P	obsolete positive regulation of transcription factor import into nucleus
GO:0043234	C	protein-containing complex

FPKM:1.47 TPM:1.24

107

A_TrvaMG_comp1020940_c0_seq1

212bp

PREDICTED:_sorting_nexin-25_[Bombyx_mori]

GO:0005768	C	endosome
GO:0006810	P	transport
GO:0010008	C	endosome membrane
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0030512	P	negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032801	P	receptor catabolic process
GO:0034713	F	type I transforming growth factor beta receptor binding
GO:0035091	F	phosphatidylinositol binding
GO:0060394	P	negative regulation of pathway-restricted SMAD protein phosphorylation