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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
751 A_TrvaMG_comp11509_c0_seq1
205bp
FPKM:4.02 TPM:3.38
752 A_TrvaMG_comp115103_c0_seq1
2891bp
Delta-1-pyrroline-5-carboxylate_dehydrogenase,_mitochondrial_[Papilio_xuthus]
GO:0003842 F 1-pyrroline-5-carboxylate dehydrogenase activity
GO:0004029 F aldehyde dehydrogenase (NAD+) activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006537 P glutamate biosynthetic process
GO:0006560 P proline metabolic process
GO:0006561 P proline biosynthetic process
GO:0008152 P metabolic process
GO:0010133 P proline catabolic process to glutamate
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0055114 P obsolete oxidation-reduction process
FPKM:5.13 TPM:4.32
753 A_TrvaMG_comp11510_c0_seq1
1134bp
PREDICTED:_gamma-taxilin_[Bombyx_mori]
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0010976 P positive regulation of neuron projection development
GO:0019905 F syntaxin binding
GO:0030017 C sarcomere
FPKM:3.52 TPM:2.96
754 A_TrvaMG_comp11511_c0_seq1
2890bp
PREDICTED:_uncharacterized_protein_LOC106138248_[Amyelois_transitella]
FPKM:2.72 TPM:2.29
755 A_TrvaMG_comp11512_c0_seq1
3395bp
PREDICTED:_uncharacterized_protein_LOC105254802,_partial_[Camponotus_floridanus]
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
FPKM:2.25 TPM:1.89
756 A_TrvaMG_comp11513_c0_seq1
558bp
FPKM:2.42 TPM:2.04
757 A_TrvaMG_comp11514_c0_seq1
1214bp
replication_protein_A2_[Bombyx_mori]
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006298 P mismatch repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0010569 P regulation of double-strand break repair via homologous recombination
GO:0016605 C PML body
GO:0019899 F enzyme binding
GO:0019903 F protein phosphatase binding
GO:0031571 P mitotic G1 DNA damage checkpoint signaling
GO:0031625 F ubiquitin protein ligase binding
GO:0035861 C site of double-strand break
GO:0047485 F protein N-terminus binding
GO:2000001 P regulation of DNA damage checkpoint
FPKM:0.44 TPM:0.37
758 A_TrvaMG_comp11514_c0_seq2
1092bp
replication_protein_A2_[Bombyx_mori]
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006298 P mismatch repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0010569 P regulation of double-strand break repair via homologous recombination
GO:0016605 C PML body
GO:0019899 F enzyme binding
GO:0019903 F protein phosphatase binding
GO:0031571 P mitotic G1 DNA damage checkpoint signaling
GO:0031625 F ubiquitin protein ligase binding
GO:0035861 C site of double-strand break
GO:0047485 F protein N-terminus binding
GO:2000001 P regulation of DNA damage checkpoint
FPKM:2.10 TPM:1.77
759 A_TrvaMG_comp11515_c0_seq1
331bp
hypothetical_protein_[Porphyromonas_uenonis]
FPKM:3.63 TPM:3.06
760 A_TrvaMG_comp11517_c0_seq1
897bp
FPKM:2.92 TPM:2.45
761 A_TrvaMG_comp11518_c0_seq1
429bp
FPKM:4.00 TPM:3.37
762 A_TrvaMG_comp11519_c0_seq1
737bp
FPKM:2.83 TPM:2.38
763 A_TrvaMG_comp11519_c1_seq1
727bp
FPKM:2.13 TPM:1.79
764 A_TrvaMG_comp11520_c0_seq1
347bp
hypothetical_protein_RR46_00407_[Papilio_xuthus]
FPKM:4.76 TPM:4.00
765 A_TrvaMG_comp11521_c0_seq1
339bp
ubiquitin/L40_ribosomal_protein_fusion_[Ordospora_colligata_OC4]
FPKM:3.80 TPM:3.20
766 A_TrvaMG_comp11522_c0_seq1
1908bp
PREDICTED:_low-density_lipoprotein_receptor-related_protein_6_[Bombyx_mori]
GO:0001702 P gastrulation with mouth forming second
GO:0001756 P somitogenesis
GO:0001843 P neural tube closure
GO:0001933 P negative regulation of protein phosphorylation
GO:0001947 P heart looping
GO:0002053 P positive regulation of mesenchymal cell proliferation
GO:0003344 P pericardium morphogenesis
GO:0003401 P axis elongation
GO:0005041 F low-density lipoprotein particle receptor activity
GO:0005102 F signaling receptor binding
GO:0005109 F frizzled binding
GO:0005515 F protein binding
GO:0005769 C early endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0006469 P negative regulation of protein kinase activity
GO:0006897 P endocytosis
GO:0007268 P chemical synaptic transmission
GO:0007275 P multicellular organism development
GO:0009880 P embryonic pattern specification
GO:0009950 P dorsal/ventral axis specification
GO:0009952 P anterior/posterior pattern specification
GO:0009986 C cell surface
GO:0014029 P neural crest formation
GO:0014033 P neural crest cell differentiation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0017147 F Wnt-protein binding
GO:0019210 F kinase inhibitor activity
GO:0019534 F toxin transmembrane transporter activity
GO:0021587 P cerebellum morphogenesis
GO:0021794 P thalamus development
GO:0021795 P cerebral cortex cell migration
GO:0021861 P forebrain radial glial cell differentiation
GO:0021872 P forebrain generation of neurons
GO:0021874 P Wnt signaling pathway involved in forebrain neuroblast division
GO:0021915 P neural tube development
GO:0021943 P formation of radial glial scaffolds
GO:0021987 P cerebral cortex development
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0030326 P embryonic limb morphogenesis
GO:0030900 P forebrain development
GO:0030901 P midbrain development
GO:0030917 P midbrain-hindbrain boundary development
GO:0031410 C cytoplasmic vesicle
GO:0034392 P negative regulation of smooth muscle cell apoptotic process
GO:0035108 P limb morphogenesis
GO:0035115 P embryonic forelimb morphogenesis
GO:0035116 P embryonic hindlimb morphogenesis
GO:0035261 P external genitalia morphogenesis
GO:0036342 P post-anal tail morphogenesis
GO:0042074 P cell migration involved in gastrulation
GO:0042127 P regulation of cell population proliferation
GO:0042475 P odontogenesis of dentin-containing tooth
GO:0042733 P embryonic digit morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0042813 F Wnt-activated receptor activity
GO:0043025 C neuronal cell body
GO:0043065 P positive regulation of apoptotic process
GO:0043235 C receptor complex
GO:0044332 P Wnt signaling pathway involved in dorsal/ventral axis specification
GO:0045202 C synapse
GO:0045599 P negative regulation of fat cell differentiation
GO:0045778 P positive regulation of ossification
GO:0045780 P positive regulation of bone resorption
GO:0045787 P positive regulation of cell cycle
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046849 P bone remodeling
GO:0048596 P embryonic camera-type eye morphogenesis
GO:0048699 P generation of neurons
GO:0048705 P skeletal system morphogenesis
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0051593 P response to folic acid
GO:0060021 P roof of mouth development
GO:0060026 P convergent extension
GO:0060042 P retina morphogenesis in camera-type eye
GO:0060059 P embryonic retina morphogenesis in camera-type eye
GO:0060070 P canonical Wnt signaling pathway
GO:0060284 P regulation of cell development
GO:0060325 P face morphogenesis
GO:0060444 P branching involved in mammary gland duct morphogenesis
GO:0060535 P trachea cartilage morphogenesis
GO:0060596 P mammary placode formation
GO:0060603 P mammary gland duct morphogenesis
GO:0061310 P canonical Wnt signaling pathway involved in cardiac neural crest cell differentiation involved in heart development
GO:0061324 P canonical Wnt signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation
GO:0071397 P cellular response to cholesterol
GO:0071542 P dopaminergic neuron differentiation
GO:0071901 P negative regulation of protein serine/threonine kinase activity
GO:0071936 F coreceptor activity involved in Wnt signaling pathway
GO:0072659 P protein localization to plasma membrane
GO:0090009 P primitive streak formation
GO:0090118 P receptor-mediated endocytosis involved in cholesterol transport
GO:0090244 P Wnt signaling pathway involved in somitogenesis
GO:0090245 P axis elongation involved in somitogenesis
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:1901998 P toxin transport
GO:1990851 C Wnt-Frizzled-LRP5/6 complex
GO:1990909 C Wnt signalosome
GO:2000051 P negative regulation of non-canonical Wnt signaling pathway
GO:2000055 P positive regulation of Wnt signaling pathway involved in dorsal/ventral axis specification
GO:2000149 P negative regulation of planar cell polarity pathway involved in ventricular septum morphogenesis
GO:2000151 P negative regulation of planar cell polarity pathway involved in cardiac muscle tissue morphogenesis
GO:2000162 P negative regulation of planar cell polarity pathway involved in cardiac right atrium morphogenesis
GO:2000164 P negative regulation of planar cell polarity pathway involved in outflow tract morphogenesis
GO:2000166 P negative regulation of planar cell polarity pathway involved in pericardium morphogenesis
GO:2000168 P negative regulation of planar cell polarity pathway involved in neural tube closure
FPKM:2.64 TPM:2.22
767 A_TrvaMG_comp11523_c0_seq1
738bp
PREDICTED:_sorting_nexin-29-like_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0035091 F phosphatidylinositol binding
GO:0070062 C extracellular exosome
FPKM:2.25 TPM:1.89
768 A_TrvaMG_comp115249_c0_seq1
1451bp
PREDICTED:_Golgi_SNAP_receptor_complex_member_1_[Papilio_polytes]
GO:0000138 C Golgi trans cisterna
GO:0000139 C Golgi membrane
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0005801 C cis-Golgi network
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0006906 P vesicle fusion
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0031201 C SNARE complex
GO:0048193 P Golgi vesicle transport
GO:0048209 P regulation of vesicle targeting, to, from or within Golgi
FPKM:6.37 TPM:5.36
769 A_TrvaMG_comp11524_c0_seq1
234bp
FPKM:3.80 TPM:3.20
770 A_TrvaMG_comp115252_c0_seq1
762bp
PREDICTED:_ragulator_complex_protein_LAMTOR3_homolog_[Papilio_polytes]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0032006 P regulation of TOR signaling
GO:0032008 P positive regulation of TOR signaling
GO:0032947 F molecular adaptor activity
GO:0034613 P cellular protein localization
GO:0043547 P positive regulation of GTPase activity
GO:0071230 P cellular response to amino acid stimulus
GO:0071986 C Ragulator complex
FPKM:8.13 TPM:6.84
771 A_TrvaMG_comp115256_c0_seq1
876bp
succinylornithine_transaminase_domain_protein_[Acinetobacter_baumannii_6013113]
FPKM:6.93 TPM:5.83
772 A_TrvaMG_comp11525_c0_seq1
807bp
FPKM:4.49 TPM:3.78
773 A_TrvaMG_comp115264_c0_seq1
1598bp
PREDICTED:_uncharacterized_protein_LOC101742132_isoform_X1_[Bombyx_mori]
FPKM:4.62 TPM:3.89
774 A_TrvaMG_comp11528_c0_seq1
734bp
FPKM:2.79 TPM:2.35
775 A_TrvaMG_comp11529_c0_seq1
383bp
FPKM:3.47 TPM:2.92
776 A_TrvaMG_comp115319_c0_seq1
1006bp
eIF2B-alpha_protein_[Bombyx_mori]
GO:0003743 F translation initiation factor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0005886 C plasma membrane
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0014003 P oligodendrocyte development
GO:0016020 C membrane
GO:0043547 P positive regulation of GTPase activity
GO:0044237 P cellular metabolic process
GO:0051716 P cellular response to stimulus
FPKM:6.01 TPM:5.06
777 A_TrvaMG_comp11531_c0_seq1
998bp
FPKM:3.07 TPM:2.59
778 A_TrvaMG_comp11532_c0_seq1
680bp
PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_H_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006457 P protein folding
GO:0006461 P protein-containing complex assembly
GO:0008380 P RNA splicing
GO:0016018 F cyclosporin A binding
GO:0016607 C nuclear speck
GO:0016853 F isomerase activity
GO:0043021 F ribonucleoprotein complex binding
GO:0045070 P positive regulation of viral genome replication
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071001 C U4/U6 snRNP
FPKM:4.06 TPM:3.42
779 A_TrvaMG_comp115336_c0_seq1
300bp
PREDICTED:_probable_isocitrate_dehydrogenase_[NAD]_subunit_alpha,_mitochondrial_isoform_X1_[Amyelois_transitella]
FPKM:12.38 TPM:10.42
780 A_TrvaMG_comp11534_c0_seq1
440bp
FPKM:0.00 TPM:0.00
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