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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
961 A_ErmoMG_comp16825_c0_seq1
418bp
FPKM:2.29 TPM:1.68
962 A_ErmoMG_comp16826_c0_seq1
759bp
poly(A)-specific_ribonuclease_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0016787 F hydrolase activity
GO:0019901 F protein kinase binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
FPKM:2.05 TPM:1.51
963 A_ErmoMG_comp16827_c0_seq1
213bp
PREDICTED:_trafficking_protein_particle_complex_subunit_10_[Bombyx_mori]
FPKM:7.17 TPM:5.28
964 A_ErmoMG_comp16828_c0_seq1
696bp
PREDICTED:_farnesol_dehydrogenase-like_isoform_X1_[Bombyx_mori]
GO:0006718 P juvenile hormone biosynthetic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0047886 F farnesol dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.76 TPM:2.03
965 A_ErmoMG_comp16830_c0_seq1
203bp
ATPase/protein_kinase_[Parabacteroides_gordonii]
FPKM:4.72 TPM:3.48
966 A_ErmoMG_comp16831_c0_seq1
469bp
L-aminoadipate-semialdehyde_dehydrogenase-phosphopantetheinyl_transferase_[Papilio_machaon]
GO:0000287 F magnesium ion binding
GO:0005737 C cytoplasm
GO:0006633 P fatty acid biosynthetic process
GO:0008897 F holo-[acyl-carrier-protein] synthase activity
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
FPKM:2.39 TPM:1.76
967 A_ErmoMG_comp16832_c0_seq1
623bp
PREDICTED:_Fanconi_anemia,_complementation_group_I_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016020 C membrane
GO:0031398 P positive regulation of protein ubiquitination
GO:0043240 C Fanconi anaemia nuclear complex
GO:0070182 F DNA polymerase binding
FPKM:2.32 TPM:1.71
968 A_ErmoMG_comp16833_c0_seq1
494bp
PREDICTED:_apoptosis-inducing_factor_3_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0006915 P apoptotic process
GO:0016491 F oxidoreductase activity
GO:0045454 P cell redox homeostasis
GO:0046872 F metal ion binding
GO:0050660 F flavin adenine dinucleotide binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
GO:0097194 P execution phase of apoptosis
FPKM:1.69 TPM:1.24
969 A_ErmoMG_comp16836_c0_seq1
290bp
FPKM:4.00 TPM:2.94
970 A_ErmoMG_comp16837_c0_seq1
257bp
FPKM:3.85 TPM:2.83
971 A_ErmoMG_comp16838_c0_seq1
712bp
PREDICTED:_stromal_interaction_molecule_1_isoform_X2_[Bombyx_mori]
FPKM:2.22 TPM:1.63
972 A_ErmoMG_comp16840_c0_seq1
385bp
PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_[Bombyx_mori]
FPKM:3.21 TPM:2.36
973 A_ErmoMG_comp16841_c0_seq1
1137bp
PREDICTED:_post-GPI_attachment_to_proteins_factor_3_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006505 P GPI anchor metabolic process
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0031227 C intrinsic component of endoplasmic reticulum membrane
FPKM:2.66 TPM:1.96
974 A_ErmoMG_comp16842_c0_seq1
502bp
FPKM:2.89 TPM:2.13
975 A_ErmoMG_comp16843_c0_seq1
531bp
hypothetical_protein_KGM_17399_[Danaus_plexippus]
FPKM:2.58 TPM:1.90
976 A_ErmoMG_comp16843_c0_seq2
615bp
PREDICTED:_rap_guanine_nucleotide_exchange_factor_2_[Papilio_polytes]
GO:0001568 P blood vessel development
GO:0001764 P neuron migration
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005923 C bicellular tight junction
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007218 P neuropeptide signaling pathway
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008285 P negative regulation of cell population proliferation
GO:0010976 P positive regulation of neuron projection development
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0017034 F guanyl-nucleotide exchange factor activity
GO:0019933 P cAMP-mediated signaling
GO:0021591 P ventricular system development
GO:0021884 P forebrain neuron development
GO:0030033 P microvillus assembly
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0030154 P cell differentiation
GO:0030165 F PDZ domain binding
GO:0030552 F cAMP binding
GO:0031175 P neuron projection development
GO:0031547 P brain-derived neurotrophic factor receptor signaling pathway
GO:0031697 F beta-1 adrenergic receptor binding
GO:0032092 P positive regulation of protein binding
GO:0032486 P Rap protein signal transduction
GO:0038180 P nerve growth factor signaling pathway
GO:0042127 P regulation of cell population proliferation
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
GO:0043547 P positive regulation of GTPase activity
GO:0043950 P positive regulation of cAMP-mediated signaling
GO:0045202 C synapse
GO:0045860 P positive regulation of protein kinase activity
GO:0048022 P negative regulation of melanin biosynthetic process
GO:0048167 P regulation of synaptic plasticity
GO:0048471 C perinuclear region of cytoplasm
GO:0050699 F WW domain binding
GO:0050774 P negative regulation of dendrite morphogenesis
GO:0061028 P establishment of endothelial barrier
GO:0070300 F phosphatidic acid binding
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0071320 P cellular response to cAMP
GO:0071321 P cellular response to cGMP
GO:0071880 P adenylate cyclase-activating adrenergic receptor signaling pathway
GO:0072659 P protein localization to plasma membrane
GO:0090557 P establishment of endothelial intestinal barrier
GO:1901888 P regulation of cell junction assembly
GO:1990090 P cellular response to nerve growth factor stimulus
GO:2000481 P positive regulation of cAMP-dependent protein kinase activity
GO:2000670 P positive regulation of dendritic cell apoptotic process
GO:2001214 P positive regulation of vasculogenesis
GO:2001224 P positive regulation of neuron migration
FPKM:2.05 TPM:1.51
977 A_ErmoMG_comp16843_c0_seq3
517bp
hypothetical_protein_KGM_17399_[Danaus_plexippus]
FPKM:0.00 TPM:0.00
978 A_ErmoMG_comp16844_c0_seq1
388bp
FPKM:3.17 TPM:2.33
979 A_ErmoMG_comp16845_c0_seq1
203bp
PREDICTED:_aquaporin-12_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:5.91 TPM:4.35
980 A_ErmoMG_comp16846_c0_seq1
390bp
PREDICTED:_WD_repeat-containing_protein_59_isoform_X1_[Bombyx_mori]
FPKM:2.10 TPM:1.54
981 A_ErmoMG_comp16847_c0_seq1
349bp
FPKM:3.10 TPM:2.28
982 A_ErmoMG_comp168494_c0_seq1
383bp
PREDICTED:_OTU_domain-containing_protein_7B-like_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006955 P immune response
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0035871 P protein K11-linked deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
GO:0043124 P negative regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045088 P regulation of innate immune response
GO:0046872 F metal ion binding
GO:0050727 P regulation of inflammatory response
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:0070536 P protein K63-linked deubiquitination
GO:0071108 P protein K48-linked deubiquitination
GO:0071947 P protein deubiquitination involved in ubiquitin-dependent protein catabolic process
FPKM:5.55 TPM:4.08
983 A_ErmoMG_comp16849_c0_seq1
363bp
FPKM:2.18 TPM:1.61
984 A_ErmoMG_comp16850_c0_seq1
493bp
PREDICTED:_uncharacterized_protein_LOC106142086_[Amyelois_transitella]
FPKM:2.75 TPM:2.03
985 A_ErmoMG_comp16851_c0_seq1
263bp
FPKM:3.97 TPM:2.92
986 A_ErmoMG_comp16852_c0_seq1
354bp
zinc_finger_C2H2_type_[Echinococcus_multilocularis]
FPKM:2.97 TPM:2.19
987 A_ErmoMG_comp16854_c0_seq1
995bp
PREDICTED:_KAT8_regulatory_NSL_complex_subunit_1-like_protein_isoform_X3_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0016568 P chromatin organization
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0043995 F histone acetyltransferase activity (H4-K5 specific)
GO:0043996 F histone acetyltransferase activity (H4-K8 specific)
GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
GO:0071339 C MLL1 complex
FPKM:1.97 TPM:1.45
988 A_ErmoMG_comp16855_c0_seq1
380bp
putative_RUN_domain-containing_protein_1_[Danaus_plexippus]
GO:0005096 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0090630 P activation of GTPase activity
FPKM:2.81 TPM:2.07
989 A_ErmoMG_comp168563_c0_seq1
777bp
PREDICTED:_programmed_cell_death_protein_2-like_[Amyelois_transitella]
GO:0005737 C cytoplasm
FPKM:2.76 TPM:2.03
990 A_ErmoMG_comp16857_c0_seq1
788bp
FPKM:1.90 TPM:1.40
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