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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp16826_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		poly(A)-specific_ribonuclease_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0016787 F hydrolase activity
GO:0019901 F protein kinase binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
Transcript
Level		FPKM:2.05 TPM:1.51
ORF EntryO_ErmoMG227_internal:A_ErmoMG_comp16826_c0_seq1
Sequence
(Nucleotide)
GGACAGTCAGATGAAATGGAAATAGACAAGTGCAATTCATTCGTAAGGTTGTTGCTGTTT
CAAGAATTGAGAACACTCTTCAAGGACAAGGTTCTGGTCGAGACAAAGATATTGGAAAAT
AAAAATAGGTTGCTAAGTGTAAGAAGAGTGAAATCACAGAATGATCTCAAGAATCATGAT
GCTATTAAGAAGGAAAGAGAATGGGAAGAGTTTGAGGATGCAGTCGGGTTTTCTAAAGTG
GCTAGGATGATAAGTGAATCTGAGAAACTGGTGATTGGACACAATATGCTTTTGGATGTA
ATGCACACTTTGAATCATTTCTTCCAGCCACTACCCACAGAATATACACAGTTCAAAGAA
TTCGCACACTGCATGTTTCCTAGTTTATTGGACACGAAATACATGTCAAGTTTACCTCCA
TTCAAAGATAAGGTCAATTCGAGTGTTCTTCAGCATTTGCTGTCAACATTGTCGGCTGCA
CCGTTTTCCCTACCAAAAGTTGTGTCAGACGAGGGTCGCGGCTACTGCCAACTGGACGAG
AAGCACCACGAGGCCGGCTACGACGCCTACGTGACGGGGCTCTGCTTCCTCGCCATGCAC
GGGCACCTCGCCGCCATGCGCGGGGACGACTCCTCGCGGGTCGCCTCCCCCTCCTCCCCC
CTCATCAAGCCCTTCCTCAACAAGGTGTTCCTGTCGCGGACGGCGCACCAGGACTCCTCC
TATATGAACTTTGCTGGAACTGAACCTCTACCGCCCAGA
(759 bp)

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