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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
511 A_ErmoMG_comp157224_c0_seq1
507bp
PREDICTED:_probable_nucleoporin_Nup54_isoform_X2_[Bombyx_mori]
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006605 P protein targeting
GO:0006606 P protein import into nucleus
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0006999 P nuclear pore organization
GO:0015031 P protein transport
GO:0017056 F structural constituent of nuclear pore
GO:0036228 P protein localization to nuclear inner membrane
GO:0044613 C nuclear pore central transport channel
GO:0051028 P mRNA transport
FPKM:4.99 TPM:3.67
512 A_ErmoMG_comp157239_c0_seq1
588bp
hypothetical_protein_RR46_01806_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0019901 F protein kinase binding
GO:0030520 P intracellular estrogen receptor signaling pathway
GO:0040007 P growth
GO:0042445 P hormone metabolic process
GO:0043565 F sequence-specific DNA binding
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050684 P regulation of mRNA processing
FPKM:5.09 TPM:3.74
513 A_ErmoMG_comp157291_c0_seq1
884bp
PREDICTED:_DDB1-_and_CUL4-associated_factor_5_[Bombyx_mori]
FPKM:4.97 TPM:3.66
514 A_ErmoMG_comp157304_c0_seq1
367bp
PREDICTED:_serine-protein_kinase_ATM,_partial_[Alligator_sinensis]
FPKM:4.12 TPM:3.03
515 A_ErmoMG_comp157533_c0_seq1
352bp
FPKM:4.24 TPM:3.12
516 A_ErmoMG_comp157650_c0_seq1
262bp
FPKM:4.61 TPM:3.39
517 A_ErmoMG_comp15768_c0_seq1
215bp
PREDICTED:_uncharacterized_protein_LOC106125781_isoform_X1_[Papilio_xuthus]
FPKM:2.00 TPM:1.47
518 A_ErmoMG_comp15800_c0_seq1
283bp
succinylglutamate_desuccinylase_[Blautia_wexlerae]
FPKM:1.57 TPM:1.16
519 A_ErmoMG_comp158264_c0_seq1
712bp
geranylgeranyl_diphosphate_synthase_[Choristoneura_fumiferana]
GO:0004161 F dimethylallyltranstransferase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006695 P cholesterol biosynthetic process
GO:0006720 P isoprenoid metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0033386 P geranylgeranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
FPKM:3.53 TPM:2.60
520 A_ErmoMG_comp158453_c0_seq1
689bp
Insect_intestinal_mucin_3_[Operophtera_brumata]
FPKM:4.42 TPM:3.26
521 A_ErmoMG_comp15885_c0_seq1
236bp
PREDICTED:_uncharacterized_protein_LOC105842077_[Bombyx_mori]
FPKM:1.56 TPM:1.15
522 A_ErmoMG_comp1589_c0_seq1
207bp
hypothetical_protein_M118_3474_[Bacteroides_fragilis_str._3783N1-2]
FPKM:1.11 TPM:0.82
523 A_ErmoMG_comp159045_c0_seq1
891bp
E3_ubiquitin-protein_ligase_SMURF2_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0008101 P BMP signaling pathway
GO:0010629 P negative regulation of gene expression
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030514 P negative regulation of BMP signaling pathway
GO:0040008 P regulation of growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0048619 P embryonic hindgut morphogenesis
FPKM:5.12 TPM:3.77
524 A_ErmoMG_comp159083_c0_seq1
566bp
PREDICTED:_uncharacterized_protein_LOC101736452_isoform_X2_[Bombyx_mori]
FPKM:4.74 TPM:3.49
525 A_ErmoMG_comp159127_c0_seq1
575bp
FPKM:4.55 TPM:3.35
526 A_ErmoMG_comp159144_c0_seq1
251bp
FPKM:9.47 TPM:6.97
527 A_ErmoMG_comp159185_c0_seq1
621bp
FPKM:3.81 TPM:2.80
528 A_ErmoMG_comp159209_c0_seq1
1572bp
PREDICTED:_uncharacterized_protein_LOC101746579_[Bombyx_mori]
FPKM:3.86 TPM:2.84
529 A_ErmoMG_comp159302_c0_seq1
502bp
hypothetical_protein_KGM_14166_[Danaus_plexippus]
FPKM:6.61 TPM:4.86
530 A_ErmoMG_comp159428_c0_seq1
1310bp
PREDICTED:_sphingosine-1-phosphate_phosphatase_1-like_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006665 P sphingolipid metabolic process
GO:0006668 P sphinganine-1-phosphate metabolic process
GO:0006670 P sphingosine metabolic process
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0042392 F sphingosine-1-phosphate phosphatase activity
GO:0097191 P extrinsic apoptotic signaling pathway
GO:0097193 P intrinsic apoptotic signaling pathway
FPKM:4.90 TPM:3.60
531 A_ErmoMG_comp159434_c0_seq1
466bp
PREDICTED:_U11/U12_small_nuclear_ribonucleoprotein_25_kDa_protein-like_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0045171 C intercellular bridge
FPKM:6.31 TPM:4.64
532 A_ErmoMG_comp159556_c0_seq1
856bp
PREDICTED:_TATA_box-binding_protein-like_protein_1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0009790 P embryo development
FPKM:3.96 TPM:2.92
533 A_ErmoMG_comp159621_c0_seq1
266bp
hypothetical_protein_[Rhodococcus_qingshengii]
FPKM:5.36 TPM:3.94
534 A_ErmoMG_comp159686_c0_seq1
646bp
FPKM:5.39 TPM:3.97
535 A_ErmoMG_comp159775_c0_seq1
893bp
FPKM:3.92 TPM:2.88
536 A_ErmoMG_comp15979_c0_seq1
212bp
Alpha-catulin,_partial_[Operophtera_brumata]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005938 C cell cortex
GO:0007155 P cell adhesion
GO:0007266 P Rho protein signal transduction
GO:0045296 F cadherin binding
GO:0051015 F actin filament binding
FPKM:1.04 TPM:0.76
537 A_ErmoMG_comp159941_c0_seq1
517bp
PREDICTED:_RWD_domain-containing_protein_2A_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:3.17 TPM:2.34
538 A_ErmoMG_comp160234_c0_seq1
204bp
hypothetical_protein_[Cryobacterium_sp._MLB-32]
FPKM:9.80 TPM:7.21
539 A_ErmoMG_comp160269_c0_seq1
552bp
Protein_Smaug_[Papilio_machaon]
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0045202 C synapse
FPKM:4.17 TPM:3.07
540 A_ErmoMG_comp160307_c0_seq1
1076bp
Ral_GTPase-activating_protein_subunit_beta_[Papilio_xuthus]
GO:0005096 F GTPase activator activity
GO:0046982 F protein heterodimerization activity
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0090630 P activation of GTPase activity
FPKM:4.11 TPM:3.02
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