SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp159428_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_sphingosine-1-phosphate_phosphatase_1-like_[Bombyx_mori]
Ontology
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006665 P sphingolipid metabolic process
GO:0006668 P sphinganine-1-phosphate metabolic process
GO:0006670 P sphingosine metabolic process
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0042392 F sphingosine-1-phosphate phosphatase activity
GO:0097191 P extrinsic apoptotic signaling pathway
GO:0097193 P intrinsic apoptotic signaling pathway
Transcript
Level		FPKM:4.90 TPM:3.60
ORF EntryO_ErmoMG22968_3prime_partial:A_ErmoMG_comp159428_c0_seq1
Sequence
(Nucleotide)
GGAACACGTAGGTCGTATTAAATCCTATCATACCATAAGTGAAGTATTTGTAGCACAACT
CAACTATAATTTTGTTTTTATTATCCAAACTATCCTCTGAGTTTCTCAGTTCGTTTTTAT
CTTTCCCTAGCAAGGCACAGACGAAGGCGTAGGAGAGGGACTTGCCCATGGCGCGGGTGG
CCAGCACTCCGCAGAACCCGAGGATGGTGCGGAGGATGGTGCAGCCCAGCATCTCCACCG
AGGGCCAGATGATGCGGTAGGGCGGCGCCAGCTCGCTGCCCGACATGTTGCCGAGCTGGT
AGTTCACCCACGAGCCGGTGAGGATGCCGGTGCACACGCTCACTATCATTGTTGTGTCGC
CTCTAGTTGGTGTCCATTTATCAGCATTTGGATGATACACAATAACTAATATTGAGGCTG
TGATGACCAGTACCGGAGCATACTCCCACATCACAAGGATGCCGTCCAGCCAGTCCACCA
AGGGTATCAAGACTAGTAGTAGACTGGAAGCAAGAAGTAAACCTGCTGCTATATCCAGCA
AACTGTGCATGCCGAGATACACTCTACTGACACAGATTAGTGTACACCACGACACAGCAA
TCAGAATCCCCCAGTGGACGGGATATATATACCTGTCCATGGTATAAAACAGTACTGAGA
ACGGCATGCACACTCCCACCATGGCGTGCGTCGAGGGCATACCATATTCCACTGCCCATT
TCTGCTGCAATTTCTTCACTGGATACCCAGGACGTGGCCATCGAATTATATCTTTGAATC
CTTGTCCTATATACATGACAACAGTCCACACAAGCACAACTCGGCGTCCTACCGCTCCAT
CAATGTTCCAAAACCAGAAAGGTATAAATGTAGCATAGAATATCTCATCACCAAGTTCCG
TTCCAAGAACGAATAAGTAGTACCAGAACTTGTTGTTAATTGAAAGTATTAGGTCATCTT
TCTCAGGCGTTTCAGCGGACGTGTCTGTGTCGTATGATGACTGGGAACTGCTGGATATAT
TACTCGGTATCCTCTTGTGCTGTTTGATGTCGGTGTCTTCTCTCAGCCGGTCAAGTCTCT
CAGAATTTACCACTTCACTTGCTTCATTTTTTTGTCGGTTAGTCTTATATGTTACACCAA
AAAAATTTTGCACTTTAACTACTAATGACGGATCTTTCAAATATTCTATAGCATTCTCCC
ACATTTTATTAGATTTTTATGTTGCCTTTGATAAAACAAAATCAGAATAGTTTTTAAAGT
GACATCTAAGGACTGTGGTTATGGCACTGTTGCTACTAAATGTACTGAAA
(1310 bp)

- SilkBase 1999-2023 -