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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
361 A_ErmoMG_comp140234_c0_seq1
1068bp
PREDICTED:_presenilins-associated_rhomboid-like_protein,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004175 F endopeptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030162 P regulation of proteolysis
GO:0090201 P negative regulation of release of cytochrome c from mitochondria
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903214 P regulation of protein targeting to mitochondrion
GO:2000377 P regulation of reactive oxygen species metabolic process
GO:2001243 P negative regulation of intrinsic apoptotic signaling pathway
FPKM:5.31 TPM:3.91
362 A_ErmoMG_comp140425_c0_seq1
229bp
FPKM:5.48 TPM:4.03
363 A_ErmoMG_comp140511_c0_seq1
749bp
hypothetical_protein_KGM_04993_[Danaus_plexippus]
FPKM:2.94 TPM:2.17
364 A_ErmoMG_comp140628_c0_seq1
311bp
FPKM:1.53 TPM:1.13
365 A_ErmoMG_comp140699_c0_seq1
310bp
FPKM:7.05 TPM:5.19
366 A_ErmoMG_comp140711_c0_seq1
305bp
FPKM:7.50 TPM:5.52
367 A_ErmoMG_comp140717_c0_seq1
830bp
PREDICTED:_wiskott-Aldrich_syndrome_protein_family_member_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007010 P cytoskeleton organization
GO:0008360 P regulation of cell shape
GO:0014003 P oligodendrocyte development
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030036 P actin cytoskeleton organization
GO:0031643 P positive regulation of myelination
GO:0070062 C extracellular exosome
FPKM:5.96 TPM:4.38
368 A_ErmoMG_comp140742_c0_seq1
300bp
Pre-mRNA-splicing_factor_SYF1_[Papilio_xuthus]
GO:0000349 P generation of catalytic spliceosome for first transesterification step
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0001824 P blastocyst development
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0021987 P cerebral cortex development
GO:0071010 C prespliceosome
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071014 C post-mRNA release spliceosomal complex
FPKM:6.79 TPM:5.00
369 A_ErmoMG_comp140768_c0_seq1
402bp
FPKM:5.86 TPM:4.31
370 A_ErmoMG_comp14082_c0_seq1
272bp
PREDICTED:_uncharacterized_protein_LOC105382185_[Plutella_xylostella]
FPKM:1.14 TPM:0.84
371 A_ErmoMG_comp140914_c0_seq1
384bp
kazal-type_proteinase_inhibitor_precursor_[Bombyx_mori]
FPKM:6.75 TPM:4.97
372 A_ErmoMG_comp140925_c0_seq1
716bp
PREDICTED:_putative_DNA_helicase_Ino80_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000790 C chromatin
GO:0000975 F transcription cis-regulatory region binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031011 C Ino80 complex
GO:0032508 P DNA duplex unwinding
GO:0040034 P regulation of development, heterochronic
GO:0045892 P negative regulation of transcription, DNA-templated
FPKM:4.28 TPM:3.15
373 A_ErmoMG_comp141124_c0_seq1
617bp
FPKM:4.86 TPM:3.57
374 A_ErmoMG_comp141138_c0_seq1
227bp
FPKM:1.29 TPM:0.95
375 A_ErmoMG_comp141493_c0_seq1
267bp
PREDICTED:_sialin-like_[Metaseiulus_occidentalis]
FPKM:3.25 TPM:2.39
376 A_ErmoMG_comp141614_c0_seq1
631bp
hypothetical_protein_KGM_14900_[Danaus_plexippus]
FPKM:3.96 TPM:2.91
377 A_ErmoMG_comp141697_c0_seq1
253bp
FPKM:9.63 TPM:7.09
378 A_ErmoMG_comp141813_c0_seq1
702bp
FPKM:4.39 TPM:3.23
379 A_ErmoMG_comp14190_c0_seq1
230bp
FPKM:1.67 TPM:1.23
380 A_ErmoMG_comp141944_c0_seq1
1100bp
PREDICTED:_zinc_finger_MYM-type_protein_4_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007010 P cytoskeleton organization
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0022604 P regulation of cell morphogenesis
GO:0046872 F metal ion binding
FPKM:3.54 TPM:2.60
381 A_ErmoMG_comp141989_c0_seq1
348bp
phenylacetaldoxime_dehydratase_[Afipia_sp._P52-10]
FPKM:5.76 TPM:4.24
382 A_ErmoMG_comp142534_c0_seq1
354bp
FPKM:5.77 TPM:4.25
383 A_ErmoMG_comp143087_c0_seq1
592bp
PREDICTED:_cytochrome_c_oxidase_assembly_factor_6_homolog_[Amyelois_transitella]
GO:0004129 F cytochrome-c oxidase activity
GO:0005507 F copper ion binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0005886 C plasma membrane
GO:0008535 P respiratory chain complex IV assembly
GO:0042774 P plasma membrane ATP synthesis coupled electron transport
GO:0044822 F RNA binding
GO:1902600 P proton transmembrane transport
FPKM:3.97 TPM:2.92
384 A_ErmoMG_comp143393_c0_seq1
751bp
Uncharacterized_protein_OBRU01_10972_[Operophtera_brumata]
GO:0008276 F protein methyltransferase activity
GO:0018364 P peptidyl-glutamine methylation
GO:0030488 P tRNA methylation
GO:0043234 C protein-containing complex
GO:0070062 C extracellular exosome
GO:0070476 P rRNA (guanine-N7)-methylation
FPKM:3.55 TPM:2.61
385 A_ErmoMG_comp143420_c0_seq1
736bp
PREDICTED:_cilia-_and_flagella-associated_protein_20_isoform_X2_[Plutella_xylostella]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0018095 P protein polyglutamylation
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0044822 F RNA binding
GO:0060271 P cilium assembly
GO:0060296 P regulation of cilium beat frequency involved in ciliary motility
GO:0070062 C extracellular exosome
GO:2000147 P positive regulation of cell motility
GO:2000253 P positive regulation of feeding behavior
FPKM:4.07 TPM:3.00
386 A_ErmoMG_comp143436_c0_seq1
1758bp
Y+L_amino_acid_transporter_2_[Papilio_xuthus]
GO:0003333 P amino acid transmembrane transport
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015101 F organic cation transmembrane transporter activity
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015179 F L-amino acid transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015695 P organic cation transport
GO:0015804 P neutral amino acid transport
GO:0015807 P L-amino acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0019534 F toxin transmembrane transporter activity
GO:0042605 F peptide antigen binding
GO:0070062 C extracellular exosome
GO:1901998 P toxin transport
GO:1902475 P L-alpha-amino acid transmembrane transport
FPKM:4.13 TPM:3.04
387 A_ErmoMG_comp143458_c0_seq1
432bp
PREDICTED:_enhancer_of_yellow_2_transcription_factor-like_[Papilio_machaon]
GO:0000124 C SAGA complex
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051028 P mRNA transport
GO:0070390 C transcription export complex 2
GO:0071819 C DUBm complex
FPKM:8.20 TPM:6.03
388 A_ErmoMG_comp143495_c0_seq1
387bp
FPKM:5.30 TPM:3.90
389 A_ErmoMG_comp143811_c0_seq1
461bp
Uncharacterized_protein_OBRU01_25729,_partial_[Operophtera_brumata]
GO:0003700 F DNA-binding transcription factor activity
GO:0003735 F structural constituent of ribosome
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006412 P translation
GO:0007275 P multicellular organism development
GO:0030529 C ribonucleoprotein complex
FPKM:6.29 TPM:4.63
390 A_ErmoMG_comp144161_c0_seq1
204bp
FPKM:13.38 TPM:9.85
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