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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
331 A_ErmoMG_comp137011_c0_seq1
1174bp
FPKM:5.60 TPM:4.12
332 A_ErmoMG_comp137039_c0_seq1
552bp
PREDICTED:_APOPT_family_protein_CG14806,_mitochondrial_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0043280 P positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0090200 P positive regulation of release of cytochrome c from mitochondria
GO:0097193 P intrinsic apoptotic signaling pathway
FPKM:6.08 TPM:4.47
333 A_ErmoMG_comp137048_c0_seq1
326bp
FPKM:9.47 TPM:6.97
334 A_ErmoMG_comp137281_c0_seq1
343bp
FPKM:5.72 TPM:4.21
335 A_ErmoMG_comp13744_c0_seq1
204bp
PREDICTED:_ATP-binding_cassette_sub-family_C_member_Sur_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0005524 F ATP binding
GO:0006031 P chitin biosynthetic process
GO:0006810 P transport
GO:0007507 P heart development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:1.75 TPM:1.28
336 A_ErmoMG_comp137462_c0_seq1
241bp
FPKM:5.57 TPM:4.10
337 A_ErmoMG_comp137560_c0_seq1
523bp
PREDICTED:_uncharacterized_protein_LOC106099995_[Papilio_polytes]
GO:0001054 F RNA polymerase I activity
GO:0001055 F RNA polymerase II activity
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005665 C RNA polymerase II, core complex
GO:0005666 C RNA polymerase III complex
GO:0005730 C nucleolus
GO:0005736 C RNA polymerase I complex
GO:0006351 P transcription, DNA-templated
GO:0006360 P transcription by RNA polymerase I
GO:0006366 P transcription by RNA polymerase II
GO:0006383 P transcription by RNA polymerase III
GO:0034587 P piRNA metabolic process
FPKM:5.27 TPM:3.88
338 A_ErmoMG_comp13772_c0_seq1
357bp
Tropomyosin-2_[Papilio_xuthus]
FPKM:1.21 TPM:0.89
339 A_ErmoMG_comp137817_c0_seq1
540bp
PREDICTED:_UPF0587_protein_GA18326_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:5.80 TPM:4.26
340 A_ErmoMG_comp137889_c0_seq1
1043bp
PREDICTED:_fibrosin-1-like_protein_isoform_X6_[Bombyx_mori]
FPKM:3.80 TPM:2.80
341 A_ErmoMG_comp137912_c0_seq1
706bp
PREDICTED:_uncharacterized_protein_LOC106111207_[Papilio_polytes]
FPKM:4.09 TPM:3.01
342 A_ErmoMG_comp137953_c0_seq1
1646bp
PREDICTED:_alpha-1,3/1,6-mannosyltransferase_ALG2_[Amyelois_transitella]
GO:0000033 F alpha-1,3-mannosyltransferase activity
GO:0004378 F GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0033577 P protein glycosylation in endoplasmic reticulum
GO:0046982 F protein heterodimerization activity
GO:0047485 F protein N-terminus binding
GO:0048306 F calcium-dependent protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051592 P response to calcium ion
GO:0097502 P mannosylation
FPKM:4.44 TPM:3.26
343 A_ErmoMG_comp137985_c0_seq1
731bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101736480_[Bombyx_mori]
FPKM:4.17 TPM:3.07
344 A_ErmoMG_comp138194_c0_seq1
570bp
survivin-1_[Bombyx_mori]
FPKM:6.95 TPM:5.12
345 A_ErmoMG_comp13838_c0_seq1
268bp
PREDICTED:_apyrase-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005886 C plasma membrane
GO:0008253 F 5'-nucleotidase activity
GO:0008768 F UDP-sugar diphosphatase activity
GO:0009166 P nucleotide catabolic process
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0031225 C anchored component of membrane
GO:0046872 F metal ion binding
FPKM:1.47 TPM:1.08
346 A_ErmoMG_comp138479_c0_seq1
299bp
FPKM:6.37 TPM:4.68
347 A_ErmoMG_comp138630_c0_seq1
553bp
FPKM:6.16 TPM:4.53
348 A_ErmoMG_comp138878_c0_seq1
1174bp
PREDICTED:_constitutive_coactivator_of_PPAR-gamma-like_protein_1_[Bombyx_mori]
FPKM:4.44 TPM:3.27
349 A_ErmoMG_comp13911_c0_seq1
203bp
FPKM:1.18 TPM:0.87
350 A_ErmoMG_comp139208_c0_seq1
1237bp
splicing_factor_45_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
FPKM:4.70 TPM:3.46
351 A_ErmoMG_comp13966_c0_seq1
216bp
FPKM:0.98 TPM:0.72
352 A_ErmoMG_comp139815_c0_seq1
584bp
FPKM:5.81 TPM:4.27
353 A_ErmoMG_comp140028_c0_seq1
987bp
PREDICTED:_LOW_QUALITY_PROTEIN:_mediator_of_RNA_polymerase_II_transcription_subunit_14_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
GO:0030518 P intracellular steroid hormone receptor signaling pathway
GO:0070847 C core mediator complex
FPKM:4.54 TPM:3.34
354 A_ErmoMG_comp140057_c0_seq1
1226bp
PREDICTED:_tubulin-specific_chaperone_D_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005923 C bicellular tight junction
GO:0006457 P protein folding
GO:0007021 P tubulin complex assembly
GO:0007023 P post-chaperonin tubulin folding pathway
GO:0010812 P negative regulation of cell-substrate adhesion
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0030054 C cell junction
GO:0031115 P negative regulation of microtubule polymerization
GO:0034333 P adherens junction assembly
GO:0043547 P positive regulation of GTPase activity
GO:0048487 F beta-tubulin binding
GO:0051087 F chaperone binding
GO:0070830 P bicellular tight junction assembly
FPKM:4.68 TPM:3.44
355 A_ErmoMG_comp140060_c0_seq1
769bp
ML-domain_containing_secreted_protein_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
FPKM:5.05 TPM:3.71
356 A_ErmoMG_comp140062_c0_seq1
579bp
hypothetical_protein_RR46_01558_[Papilio_xuthus]
FPKM:5.88 TPM:4.32
357 A_ErmoMG_comp14006_c0_seq1
378bp
PREDICTED:_uncharacterized_protein_LOC105842209_[Bombyx_mori]
FPKM:0.47 TPM:0.35
358 A_ErmoMG_comp140137_c0_seq1
459bp
PREDICTED:_CDKN2A-interacting_protein-like_[Amyelois_transitella]
GO:0001652 C granular component
GO:0002039 F p53 binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006974 P cellular response to DNA damage stimulus
GO:0009967 P positive regulation of signal transduction
GO:0030307 P positive regulation of cell growth
GO:0030308 P negative regulation of cell growth
GO:0031647 P regulation of protein stability
FPKM:5.98 TPM:4.40
359 A_ErmoMG_comp140217_c0_seq1
345bp
FPKM:7.12 TPM:5.24
360 A_ErmoMG_comp140224_c0_seq1
397bp
FPKM:7.86 TPM:5.79
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