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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1021 A_ErmoMG_comp168852_c0_seq1
766bp
FPKM:4.83 TPM:3.56
1022 A_ErmoMG_comp16885_c0_seq1
516bp
PREDICTED:_NADH_dehydrogenase_(ubiquinone)_complex_I,_assembly_factor_6_[Plutella_xylostella]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0009058 P biosynthetic process
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0032981 P mitochondrial respiratory chain complex I assembly
FPKM:2.39 TPM:1.76
1023 A_ErmoMG_comp168866_c0_seq1
467bp
hypothetical_protein_KGM_06199_[Danaus_plexippus]
FPKM:6.18 TPM:4.54
1024 A_ErmoMG_comp16886_c0_seq1
1263bp
PREDICTED:_non-canonical_poly(A)_RNA_polymerase_PAPD5-like_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004652 F polynucleotide adenylyltransferase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0071044 P histone mRNA catabolic process
GO:0071897 P DNA biosynthetic process
FPKM:1.89 TPM:1.39
1025 A_ErmoMG_comp16886_c0_seq2
1335bp
PREDICTED:_non-canonical_poly(A)_RNA_polymerase_PAPD5-like_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004652 F polynucleotide adenylyltransferase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0071044 P histone mRNA catabolic process
GO:0071897 P DNA biosynthetic process
FPKM:0.59 TPM:0.44
1026 A_ErmoMG_comp16887_c0_seq1
689bp
PREDICTED:_low-density_lipoprotein_receptor-related_protein_6_[Bombyx_mori]
GO:0001702 P gastrulation with mouth forming second
GO:0001944 P vasculature development
GO:0002053 P positive regulation of mesenchymal cell proliferation
GO:0002076 P osteoblast development
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006007 P glucose catabolic process
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0008203 P cholesterol metabolic process
GO:0008217 P regulation of blood pressure
GO:0008284 P positive regulation of cell population proliferation
GO:0009952 P anterior/posterior pattern specification
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0017147 F Wnt-protein binding
GO:0033690 P positive regulation of osteoblast proliferation
GO:0035019 P somatic stem cell population maintenance
GO:0035108 P limb morphogenesis
GO:0035426 P extracellular matrix-cell signaling
GO:0042074 P cell migration involved in gastrulation
GO:0042632 P cholesterol homeostasis
GO:0042733 P embryonic digit morphogenesis
GO:0042813 F Wnt-activated receptor activity
GO:0042981 P regulation of apoptotic process
GO:0043235 C receptor complex
GO:0044332 P Wnt signaling pathway involved in dorsal/ventral axis specification
GO:0045600 P positive regulation of fat cell differentiation
GO:0045668 P negative regulation of osteoblast differentiation
GO:0045840 P positive regulation of mitotic nuclear division
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046849 P bone remodeling
GO:0046850 P regulation of bone remodeling
GO:0048539 P bone marrow development
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0060033 P anatomical structure regression
GO:0060042 P retina morphogenesis in camera-type eye
GO:0060070 P canonical Wnt signaling pathway
GO:0060348 P bone development
GO:0060349 P bone morphogenesis
GO:0060444 P branching involved in mammary gland duct morphogenesis
GO:0060603 P mammary gland duct morphogenesis
GO:0060612 P adipose tissue development
GO:0060764 P cell-cell signaling involved in mammary gland development
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0061178 P regulation of insulin secretion involved in cellular response to glucose stimulus
GO:0061299 P retina vasculature morphogenesis in camera-type eye
GO:0061304 P retinal blood vessel morphogenesis
GO:0071901 P negative regulation of protein serine/threonine kinase activity
GO:0071936 F coreceptor activity involved in Wnt signaling pathway
GO:1902262 P apoptotic process involved in blood vessel morphogenesis
GO:1904395 P positive regulation of skeletal muscle acetylcholine-gated channel clustering
FPKM:2.72 TPM:2.00
1027 A_ErmoMG_comp16889_c0_seq1
793bp
FPKM:2.86 TPM:2.11
1028 A_ErmoMG_comp16890_c0_seq1
761bp
PREDICTED:_ras-related_GTP-binding_protein_A_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0006915 P apoptotic process
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008219 P cell death
GO:0009267 P cellular response to starvation
GO:0010506 P regulation of autophagy
GO:0010507 P negative regulation of autophagy
GO:0019048 P modulation by virus of host process
GO:0031625 F ubiquitin protein ligase binding
GO:0032008 P positive regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0034448 C Ragulator complex
GO:0034613 P cellular protein localization
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045919 P positive regulation of cytolysis
GO:0046982 F protein heterodimerization activity
GO:0051219 F phosphoprotein binding
GO:0071230 P cellular response to amino acid stimulus
GO:1904263 P positive regulation of TORC1 signaling
GO:1990130 C GATOR1 complex
GO:1990131 C Gtr1-Gtr2 GTPase complex
FPKM:0.57 TPM:0.42
1029 A_ErmoMG_comp16890_c0_seq2
1365bp
PREDICTED:_ras-related_GTP-binding_protein_A_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0006915 P apoptotic process
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008219 P cell death
GO:0009267 P cellular response to starvation
GO:0010506 P regulation of autophagy
GO:0010507 P negative regulation of autophagy
GO:0019048 P modulation by virus of host process
GO:0031625 F ubiquitin protein ligase binding
GO:0032008 P positive regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0034448 C Ragulator complex
GO:0034613 P cellular protein localization
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045919 P positive regulation of cytolysis
GO:0046982 F protein heterodimerization activity
GO:0051219 F phosphoprotein binding
GO:0071230 P cellular response to amino acid stimulus
GO:1904263 P positive regulation of TORC1 signaling
GO:1990130 C GATOR1 complex
GO:1990131 C Gtr1-Gtr2 GTPase complex
FPKM:3.55 TPM:2.61
1030 A_ErmoMG_comp16891_c0_seq1
1112bp
PREDICTED:_fat-like_cadherin-related_tumor_suppressor_homolog_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007293 P germarium-derived egg chamber formation
GO:0007295 P growth of a germarium-derived egg chamber
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0030950 P establishment or maintenance of actin cytoskeleton polarity
GO:0042247 P establishment of planar polarity of follicular epithelium
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045089 P positive regulation of innate immune response
GO:0045571 P negative regulation of imaginal disc growth
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050839 F cell adhesion molecule binding
GO:0060429 P epithelium development
FPKM:3.84 TPM:2.83
1031 A_ErmoMG_comp168924_c0_seq1
279bp
FPKM:4.05 TPM:2.98
1032 A_ErmoMG_comp16892_c0_seq1
1652bp
titin2_[Bombyx_mori]
GO:0000794 C condensed nuclear chromosome
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005863 C striated muscle myosin thick filament
GO:0005875 C microtubule associated complex
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007520 P myoblast fusion
GO:0007522 P visceral muscle development
GO:0007525 P somatic muscle development
GO:0008307 F structural constituent of muscle
GO:0016203 P muscle attachment
GO:0019233 P sensory perception of pain
GO:0030017 C sarcomere
GO:0030018 C Z disc
GO:0031674 C I band
GO:0035206 P regulation of hemocyte proliferation
GO:0040011 P locomotion
GO:0045214 P sarcomere organization
GO:0051301 P cell division
FPKM:2.74 TPM:2.02
1033 A_ErmoMG_comp16895_c0_seq1
668bp
FPKM:3.33 TPM:2.45
1034 A_ErmoMG_comp16895_c1_seq1
461bp
FPKM:2.91 TPM:2.14
1035 A_ErmoMG_comp16896_c0_seq1
1435bp
PREDICTED:_another_transcription_unit_protein_isoform_X2_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0016570 P histone modification
GO:0016593 C Cdc73/Paf1 complex
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035206 P regulation of hemocyte proliferation
GO:1990269 F RNA polymerase II C-terminal domain phosphoserine binding
FPKM:3.34 TPM:2.46
1036 A_ErmoMG_comp168976_c0_seq1
415bp
FPKM:3.95 TPM:2.90
1037 A_ErmoMG_comp16897_c0_seq1
1339bp
PREDICTED:_LOW_QUALITY_PROTEIN:_RNA-binding_protein_NOB1_[Bombyx_mori]
GO:0000469 P cleavage involved in rRNA processing
GO:0003674 F molecular_function
GO:0004521 F endoribonuclease activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0007601 P visual perception
GO:0008150 P biological_process
GO:0030490 P maturation of SSU-rRNA
GO:0030688 C preribosome, small subunit precursor
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:3.21 TPM:2.36
1038 A_ErmoMG_comp16898_c0_seq1
253bp
FPKM:5.31 TPM:3.91
1039 A_ErmoMG_comp168994_c0_seq1
222bp
FPKM:6.40 TPM:4.71
1040 A_ErmoMG_comp16899_c0_seq1
308bp
putative_DNA-directed_RNA_polymerase_II_largest_subunit_[Danaus_plexippus]
FPKM:3.79 TPM:2.79
1041 A_ErmoMG_comp16899_c0_seq2
377bp
putative_DNA-directed_RNA_polymerase_II_largest_subunit_[Danaus_plexippus]
FPKM:0.00 TPM:0.00
1042 A_ErmoMG_comp16900_c0_seq1
693bp
PREDICTED:_maternal_protein_tudor_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0007275 P multicellular organism development
GO:0007277 P pole cell development
GO:0007278 P pole cell fate determination
GO:0007281 P germ cell development
GO:0007315 P pole plasm assembly
GO:0008298 P intracellular mRNA localization
GO:0019090 P mitochondrial rRNA export from mitochondrion
GO:0030154 P cell differentiation
GO:0030719 P P granule organization
GO:0043186 C P granule
GO:0045495 C pole plasm
GO:0048477 P oogenesis
FPKM:3.31 TPM:2.44
1043 A_ErmoMG_comp16901_c0_seq1
336bp
PREDICTED:_zinc_finger_protein_665_isoform_X2_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:3.44 TPM:2.53
1044 A_ErmoMG_comp16902_c0_seq1
716bp
FPKM:3.31 TPM:2.43
1045 A_ErmoMG_comp16903_c0_seq1
278bp
PREDICTED:_LOW_QUALITY_PROTEIN:_dedicator_of_cytokinesis_protein_4_[Papilio_machaon]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007264 P small GTPase mediated signal transduction
GO:0014911 P positive regulation of smooth muscle cell migration
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0030165 F PDZ domain binding
GO:0030971 F receptor tyrosine kinase binding
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0043547 P positive regulation of GTPase activity
GO:0048365 F small GTPase binding
GO:0060326 P cell chemotaxis
GO:1904694 P negative regulation of vascular associated smooth muscle contraction
FPKM:5.71 TPM:4.20
1046 A_ErmoMG_comp16904_c0_seq1
429bp
PREDICTED:_LOW_QUALITY_PROTEIN:_monocarboxylate_transporter_14-like_[Bombyx_mori]
FPKM:4.01 TPM:2.95
1047 A_ErmoMG_comp16905_c0_seq1
631bp
PREDICTED:_LOW_QUALITY_PROTEIN:_protein_split_ends_[Bombyx_mori]
FPKM:3.04 TPM:2.24
1048 A_ErmoMG_comp16906_c0_seq1
328bp
PREDICTED:_proline-rich_protein_HaeIII_subfamily_1-like_[Rattus_norvegicus]
FPKM:3.99 TPM:2.93
1049 A_ErmoMG_comp16907_c0_seq1
632bp
PREDICTED:_LOW_QUALITY_PROTEIN:_treacle_protein_[Bombyx_mori]
FPKM:3.65 TPM:2.68
1050 A_ErmoMG_comp16910_c0_seq1
894bp
PREDICTED:_uncharacterized_protein_LOC101746612_isoform_X2_[Bombyx_mori]
FPKM:2.87 TPM:2.11
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