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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
451 A_BomoSK_comp10216_c0_seq1
636bp
 PREDICTED:_uncharacterized_protein_LOC106132264_[Amyelois_transitella]
FPKM:4.80 TPM:4.82
452 A_BomoSK_comp10216_c0_seq2
845bp
 PREDICTED:_uncharacterized_protein_LOC106132264_[Amyelois_transitella]
FPKM:0.01 TPM:0.01
453 A_BomoSK_comp10216_c0_seq3
901bp
 PREDICTED:_uncharacterized_protein_LOC106132264_[Amyelois_transitella]
FPKM:1.89 TPM:1.90
454 A_BomoSK_comp10216_c0_seq4
580bp
 PREDICTED:_uncharacterized_protein_LOC106132264_[Amyelois_transitella]
FPKM:1.98 TPM:1.99
455 A_BomoSK_comp102176_c0_seq1
907bp
 hypothetical_protein_[Bacillus_sp._FJAT-18019]
FPKM:3.20 TPM:3.22
456 A_BomoSK_comp10217_c0_seq1
470bp
 PREDICTED:_set1/Ash2_histone_methyltransferase_complex_subunit_ASH2-like_[Papilio_machaon]
GO:0002168 P instar larval development
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007420 P brain development
GO:0007444 P imaginal disc development
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008270 F zinc ion binding
GO:0010628 P positive regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0019899 F enzyme binding
GO:0033128 P negative regulation of histone phosphorylation
GO:0035075 P response to ecdysone
GO:0035209 P pupal development
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044212 F transcription cis-regulatory region binding
GO:0044665 C MLL1/2 complex
GO:0044666 C MLL3/4 complex
GO:0046872 F metal ion binding
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048188 C Set1C/COMPASS complex
GO:0048813 P dendrite morphogenesis
GO:0051568 P histone H3-K4 methylation
GO:0051571 P positive regulation of histone H3-K4 methylation
FPKM:3.66 TPM:3.68
457 A_BomoSK_comp10217_c0_seq2
1042bp
 PREDICTED:_set1/Ash2_histone_methyltransferase_complex_subunit_ASH2_[Papilio_xuthus]
GO:0002168 P instar larval development
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007420 P brain development
GO:0007444 P imaginal disc development
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008270 F zinc ion binding
GO:0010628 P positive regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0019899 F enzyme binding
GO:0033128 P negative regulation of histone phosphorylation
GO:0035075 P response to ecdysone
GO:0035209 P pupal development
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044212 F transcription cis-regulatory region binding
GO:0044665 C MLL1/2 complex
GO:0044666 C MLL3/4 complex
GO:0046872 F metal ion binding
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048188 C Set1C/COMPASS complex
GO:0048813 P dendrite morphogenesis
GO:0051568 P histone H3-K4 methylation
GO:0051571 P positive regulation of histone H3-K4 methylation
FPKM:5.51 TPM:5.54
458 A_BomoSK_comp10218_c0_seq1
317bp
FPKM:2.16 TPM:2.17
459 A_BomoSK_comp10219_c0_seq1
2263bp
 PREDICTED:_spindle_assembly_abnormal_protein_6_homolog_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007099 P centriole replication
GO:0051298 P centrosome duplication
GO:0098536 C deuterosome
FPKM:0.82 TPM:0.83
460 A_BomoSK_comp10219_c0_seq2
1010bp
 PREDICTED:_spindle_assembly_abnormal_protein_6_homolog_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007099 P centriole replication
GO:0051298 P centrosome duplication
GO:0098536 C deuterosome
FPKM:0.72 TPM:0.73
461 A_BomoSK_comp10219_c0_seq3
2246bp
 PREDICTED:_spindle_assembly_abnormal_protein_6_homolog_isoform_X2_[Bombyx_mori]
GO:0000280 P nuclear division
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007052 P mitotic spindle organization
GO:0007099 P centriole replication
GO:0007283 P spermatogenesis
GO:0040016 P embryonic cleavage
GO:0051298 P centrosome duplication
GO:0098536 C deuterosome
FPKM:4.29 TPM:4.31
462 A_BomoSK_comp1021_c0_seq1
308bp
FPKM:0.46 TPM:0.47
463 A_BomoSK_comp10220_c0_seq1
1065bp
 PREDICTED:_uncharacterized_protein_LOC101738110_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006491 P N-glycan processing
GO:0006517 P protein deglycosylation
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0033925 F mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
FPKM:1.86 TPM:1.87
464 A_BomoSK_comp10220_c1_seq1
241bp
FPKM:0.94 TPM:0.95
465 A_BomoSK_comp10220_c1_seq2
1375bp
 PREDICTED:_uncharacterized_protein_LOC101738110_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0033925 F mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
FPKM:2.46 TPM:2.48
466 A_BomoSK_comp10221_c0_seq1
1772bp
 PREDICTED:_vanin-like_protein_2_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006807 P nitrogen compound metabolic process
GO:0008150 P biological_process
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016811 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
FPKM:5.14 TPM:5.17
467 A_BomoSK_comp102222_c0_seq1
678bp
FPKM:2.87 TPM:2.89
468 A_BomoSK_comp10222_c0_seq1
594bp
FPKM:3.74 TPM:3.76
469 A_BomoSK_comp10222_c1_seq1
1806bp
 serine_protease_inhibitor_13_precursor_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
FPKM:6.21 TPM:6.25
470 A_BomoSK_comp10223_c0_seq1
802bp
 PREDICTED:_structural_maintenance_of_chromosomes_protein_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000803 C sex chromosome
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016605 C PML body
GO:0030054 C cell junction
GO:0030915 C Smc5-Smc6 complex
GO:0034184 P positive regulation of maintenance of mitotic sister chromatid cohesion
GO:0035061 C interchromatin granule
GO:0035861 C site of double-strand break
GO:0045842 P positive regulation of mitotic metaphase/anaphase transition
GO:0051301 P cell division
GO:0051984 P positive regulation of chromosome segregation
GO:0090398 P cellular senescence
FPKM:2.29 TPM:2.30
471 A_BomoSK_comp102243_c0_seq1
979bp
 hypothetical_protein_[Bacillus_sp._SA1-12]
FPKM:5.54 TPM:5.57
472 A_BomoSK_comp10225_c0_seq1
469bp
 NAD-dependent_protein_deacetylase_[Operophtera_brumata]
GO:0004407 F histone deacetylase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0070403 F NAD+ binding
FPKM:1.74 TPM:1.75
473 A_BomoSK_comp10225_c0_seq2
568bp
 NAD-dependent_protein_deacetylase_[Operophtera_brumata]
GO:0004407 F histone deacetylase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0070403 F NAD+ binding
FPKM:1.68 TPM:1.69
474 A_BomoSK_comp10225_c0_seq3
905bp
 PREDICTED:_NAD-dependent_protein_deacylase_Sirt4_[Amyelois_transitella]
GO:0004407 F histone deacetylase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0070403 F NAD+ binding
FPKM:4.70 TPM:4.73
475 A_BomoSK_comp1022634_c0_seq1
310bp
 hypothetical_protein_HYPSUDRAFT_71414_[Hypholoma_sublateritium_FD-334_SS-4]
FPKM:0.91 TPM:0.92
476 A_BomoSK_comp10226_c0_seq1
3190bp
 PREDICTED:_dymeclin_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005794 C Golgi apparatus
GO:0007030 P Golgi organization
GO:0008150 P biological_process
FPKM:5.71 TPM:5.74
477 A_BomoSK_comp1022743_c0_seq1
299bp
FPKM:1.00 TPM:1.00
478 A_BomoSK_comp10227_c0_seq1
1011bp
FPKM:4.92 TPM:4.94
479 A_BomoSK_comp10228_c0_seq1
368bp
 PREDICTED:_dehydrogenase/reductase_SDR_family_member_4_[Atta_cephalotes]
FPKM:0.70 TPM:0.70
480 A_BomoSK_comp10228_c0_seq2
990bp
 PREDICTED:_dehydrogenase/reductase_SDR_family_member_4_[Papilio_xuthus]
GO:0004090 F carbonyl reductase (NADPH) activity
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:7.13 TPM:7.17
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