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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
301 A_BomoSK_comp101360_c0_seq1
482bp
 PREDICTED:_periodic_tryptophan_protein_1_homolog_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005794 C Golgi apparatus
GO:0034773 P histone H4-K20 trimethylation
GO:1903262 P negative regulation of peptidyl-serine phosphorylation of STAT protein
GO:1990889 F H4K20me3 modified histone binding
GO:2000738 P positive regulation of stem cell differentiation
FPKM:5.93 TPM:5.97
302 A_BomoSK_comp10136_c0_seq1
252bp
 PREDICTED:_survivin-1_isoform_X1_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0001890 P placenta development
GO:0004842 F ubiquitin-protein transferase activity
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030414 F peptidase inhibitor activity
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0042127 P regulation of cell population proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0051301 P cell division
GO:0060711 P labyrinthine layer development
GO:0060712 P spongiotrophoblast layer development
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:6.50 TPM:6.54
303 A_BomoSK_comp10136_c0_seq2
244bp
 PREDICTED:_survivin-1_isoform_X1_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0001890 P placenta development
GO:0004842 F ubiquitin-protein transferase activity
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030414 F peptidase inhibitor activity
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0042127 P regulation of cell population proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0051301 P cell division
GO:0060711 P labyrinthine layer development
GO:0060712 P spongiotrophoblast layer development
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:0.00 TPM:0.00
304 A_BomoSK_comp10136_c0_seq3
538bp
 Baculoviral_IAP_repeat-containing_protein_6_[Papilio_machaon]
GO:0000922 C spindle pole
GO:0001890 P placenta development
GO:0004842 F ubiquitin-protein transferase activity
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030414 F peptidase inhibitor activity
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0042127 P regulation of cell population proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0051301 P cell division
GO:0060711 P labyrinthine layer development
GO:0060712 P spongiotrophoblast layer development
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:9.80 TPM:9.86
305 A_BomoSK_comp101374_c0_seq1
900bp
FPKM:4.89 TPM:4.92
306 A_BomoSK_comp10137_c0_seq1
3862bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
FPKM:6.02 TPM:6.06
307 A_BomoSK_comp10138_c0_seq1
765bp
 hypothetical_protein_RR48_06180_[Papilio_machaon]
FPKM:6.00 TPM:6.04
308 A_BomoSK_comp10138_c0_seq2
779bp
 hypothetical_protein_RR48_06180_[Papilio_machaon]
FPKM:8.98 TPM:9.03
309 A_BomoSK_comp10138_c0_seq3
788bp
 hypothetical_protein_RR48_06180_[Papilio_machaon]
FPKM:71.38 TPM:71.79
310 A_BomoSK_comp1013904_c0_seq1
215bp
FPKM:2.93 TPM:2.95
311 A_BomoSK_comp101399_c0_seq1
455bp
 PREDICTED:_DNA_replication_licensing_factor_Mcm5-like_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000712 P resolution of meiotic recombination intermediates
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0003688 F DNA replication origin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0007126 P meiotic cell cycle
GO:0016787 F hydrolase activity
GO:0030261 P chromosome condensation
GO:0032508 P DNA duplex unwinding
GO:0042023 P DNA endoreduplication
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
FPKM:6.74 TPM:6.78
312 A_BomoSK_comp10139_c0_seq1
3897bp
 PREDICTED:_mevalonate_kinase_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004496 F mevalonate kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0008152 P metabolic process
GO:0008202 P steroid metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016126 P sterol biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019287 P isopentenyl diphosphate biosynthetic process, mevalonate pathway
FPKM:2.71 TPM:2.73
313 A_BomoSK_comp10140_c0_seq1
928bp
FPKM:6.38 TPM:6.42
314 A_BomoSK_comp10141_c0_seq1
1895bp
 PREDICTED:_DNA-directed_RNA_polymerase_III_subunit_RPC4_isoform_X1_[Amyelois_transitella]
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006383 P transcription by RNA polymerase III
GO:0032728 P positive regulation of interferon-beta production
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0051607 P defense response to virus
FPKM:2.43 TPM:2.45
315 A_BomoSK_comp10142_c0_seq1
1452bp
 PREDICTED:_transmembrane_protein_adipocyte-associated_1_homolog_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:2.84 TPM:2.86
316 A_BomoSK_comp10142_c1_seq1
208bp
 hypothetical_protein_AGABI1DRAFT_108395_[Agaricus_bisporus_var._burnettii_JB137-S8]
FPKM:6.78 TPM:6.82
317 A_BomoSK_comp10143_c0_seq1
2208bp
 PREDICTED:_uncharacterized_protein_LOC101741768,_partial_[Bombyx_mori]
FPKM:5.17 TPM:5.20
318 A_BomoSK_comp101446_c0_seq1
1207bp
 PREDICTED:_serine/threonine-protein_kinase_GA29083_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
FPKM:5.46 TPM:5.49
319 A_BomoSK_comp10144_c0_seq1
625bp
FPKM:5.79 TPM:5.82
320 A_BomoSK_comp101459_c0_seq1
1147bp
FPKM:4.04 TPM:4.07
321 A_BomoSK_comp10145_c0_seq1
1950bp
FPKM:3.27 TPM:3.29
322 A_BomoSK_comp10147_c0_seq1
312bp
 MULTISPECIES:_hypothetical_protein_[Gammaproteobacteria]
FPKM:2.69 TPM:2.71
323 A_BomoSK_comp10147_c0_seq2
1579bp
FPKM:4.08 TPM:4.10
324 A_BomoSK_comp10147_c0_seq3
313bp
 MULTISPECIES:_hypothetical_protein_[Gammaproteobacteria]
FPKM:0.00 TPM:0.00
325 A_BomoSK_comp10148_c0_seq1
535bp
FPKM:1.13 TPM:1.14
326 A_BomoSK_comp10149_c0_seq1
2450bp
 PREDICTED:_uncharacterized_protein_LOC106131494_[Amyelois_transitella]
FPKM:6.98 TPM:7.02
327 A_BomoSK_comp1014_c0_seq1
273bp
FPKM:0.64 TPM:0.64
328 A_BomoSK_comp10150_c0_seq1
251bp
FPKM:4.11 TPM:4.14
329 A_BomoSK_comp101514_c0_seq1
1949bp
FPKM:2.33 TPM:2.34
330 A_BomoSK_comp1015177_c0_seq1
214bp
FPKM:2.99 TPM:3.01
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