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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1081 A_BomoSK_comp10523_c0_seq2
330bp
 hypothetical_protein_SELMODRAFT_119480,_partial_[Selaginella_moellendorffii]
FPKM:1.57 TPM:1.58
1082 A_BomoSK_comp105256_c0_seq1
293bp
FPKM:4.73 TPM:4.75
1083 A_BomoSK_comp10525_c0_seq1
407bp
 H3K9_methyltransferase-like_[Bombyx_mori]
FPKM:1.80 TPM:1.81
1084 A_BomoSK_comp10525_c1_seq1
669bp
 H3K9_methyltransferase-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0000976 F transcription cis-regulatory region binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006333 P chromatin assembly or disassembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030154 P cell differentiation
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0036123 P histone H3-K9 dimethylation
GO:0036124 P histone H3-K9 trimethylation
GO:0042754 P negative regulation of circadian rhythm
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0048511 P rhythmic process
GO:0071456 P cellular response to hypoxia
FPKM:2.57 TPM:2.59
1085 A_BomoSK_comp10525_c2_seq1
211bp
 H3K9_methyltransferase-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006333 P chromatin assembly or disassembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030154 P cell differentiation
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0051567 P histone H3-K9 methylation
GO:0071456 P cellular response to hypoxia
FPKM:0.00 TPM:0.00
1086 A_BomoSK_comp10526_c0_seq1
886bp
 PREDICTED:_coiled-coil_domain-containing_protein_39_[Amyelois_transitella]
GO:0003341 P cilium movement
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0036159 P inner dynein arm assembly
GO:0042995 C cell projection
GO:0060285 P cilium-dependent cell motility
GO:0060287 P epithelial cilium movement involved in determination of left/right asymmetry
GO:0070286 P axonemal dynein complex assembly
FPKM:1.85 TPM:1.86
1087 A_BomoSK_comp10526_c1_seq1
264bp
 hypothetical_protein_KGM_13977_[Danaus_plexippus]
FPKM:0.00 TPM:0.00
1088 A_BomoSK_comp10526_c1_seq2
609bp
 PREDICTED:_coiled-coil_domain-containing_protein_39_[Amyelois_transitella]
FPKM:1.07 TPM:1.07
1089 A_BomoSK_comp105275_c0_seq1
1110bp
 PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
FPKM:4.20 TPM:4.23
1090 A_BomoSK_comp10527_c0_seq1
211bp
FPKM:0.00 TPM:0.00
1091 A_BomoSK_comp10527_c1_seq1
276bp
FPKM:2.47 TPM:2.48
1092 A_BomoSK_comp105286_c0_seq1
387bp
 PREDICTED:_uncharacterized_protein_LOC106143241_isoform_X4_[Amyelois_transitella]
FPKM:5.65 TPM:5.68
1093 A_BomoSK_comp10528_c0_seq1
356bp
 PREDICTED:_polypeptide_N-acetylgalactosaminyltransferase_3-like_[Bombyx_mori]
FPKM:0.67 TPM:0.67
1094 A_BomoSK_comp10529_c0_seq1
323bp
FPKM:0.83 TPM:0.83
1095 A_BomoSK_comp10529_c1_seq1
419bp
 PREDICTED:_uncharacterized_protein_LOC106721380_[Papilio_machaon]
FPKM:1.49 TPM:1.49
1096 A_BomoSK_comp10529_c1_seq2
421bp
 hypothetical_protein_EPUS_04647_[Endocarpon_pusillum_Z07020]
FPKM:57.71 TPM:58.05
1097 A_BomoSK_comp10529_c1_seq3
587bp
 PREDICTED:_uncharacterized_protein_LOC106114094_[Papilio_xuthus]
FPKM:2.38 TPM:2.39
1098 A_BomoSK_comp1052_c0_seq1
482bp
FPKM:1.53 TPM:1.54
1099 A_BomoSK_comp1052_c1_seq1
316bp
FPKM:0.00 TPM:0.00
1100 A_BomoSK_comp10530_c0_seq1
1343bp
FPKM:6.04 TPM:6.07
1101 A_BomoSK_comp10530_c1_seq1
820bp
FPKM:2.28 TPM:2.29
1102 A_BomoSK_comp105310_c0_seq1
2435bp
 PREDICTED:_DNA-directed_RNA_polymerase_I_subunit_RPA2_[Papilio_polytes]
GO:0001054 F RNA polymerase I activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005736 C RNA polymerase I complex
GO:0006351 P transcription, DNA-templated
GO:0006360 P transcription by RNA polymerase I
GO:0016049 P cell growth
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0022008 P neurogenesis
GO:0032549 F ribonucleoside binding
GO:0045793 P positive regulation of cell size
GO:0046872 F metal ion binding
FPKM:4.02 TPM:4.05
1103 A_BomoSK_comp105313_c0_seq1
1450bp
 PREDICTED:_DNA_replication_licensing_factor_Mcm3_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
FPKM:5.52 TPM:5.55
1104 A_BomoSK_comp10531_c0_seq1
659bp
 PREDICTED:_PH_and_SEC7_domain-containing_protein_2_isoform_X3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005886 C plasma membrane
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0032011 P ARF protein signal transduction
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
FPKM:6.09 TPM:6.12
1105 A_BomoSK_comp10532_c0_seq1
1172bp
 Tropomyosin_[Papilio_xuthus]
FPKM:7.94 TPM:7.99
1106 A_BomoSK_comp10532_c0_seq2
540bp
 PREDICTED:_tropomyosin_beta_chain_isoform_X15_[Papilio_polytes]
FPKM:12.62 TPM:12.69
1107 A_BomoSK_comp105338_c0_seq1
3231bp
 hypothetical_protein_KGM_04110_[Danaus_plexippus]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006479 P protein methylation
GO:0008168 F methyltransferase activity
GO:0008469 F histone-arginine N-methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0019919 P peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
GO:0032259 P methylation
GO:0034969 P histone arginine methylation
GO:0035241 F protein-arginine omega-N monomethyltransferase activity
GO:0035242 F protein-arginine omega-N asymmetric methyltransferase activity
GO:0042054 F histone methyltransferase activity
FPKM:3.60 TPM:3.62
1108 A_BomoSK_comp10533_c0_seq1
1547bp
 PREDICTED:_uncharacterized_protein_LOC105841951_[Bombyx_mori]
FPKM:5.46 TPM:5.49
1109 A_BomoSK_comp10533_c1_seq1
472bp
 metallophosphoesterase_[Treponema_saccharophilum]
FPKM:8.52 TPM:8.57
1110 A_BomoSK_comp105346_c0_seq1
744bp
 PREDICTED:_optineurin_isoform_X3_[Bombyx_mori]
FPKM:5.26 TPM:5.29
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