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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
511 A_BomoMG_comp132502_c0_seq1
229bp
FPKM:5.90 TPM:4.66
512 A_BomoMG_comp132503_c0_seq1
213bp
FPKM:8.95 TPM:7.07
513 A_BomoMG_comp132527_c0_seq1
1052bp
 PREDICTED:_uncharacterized_protein_LOC106117054_[Papilio_xuthus]
FPKM:5.82 TPM:4.60
514 A_BomoMG_comp132535_c0_seq1
2497bp
 PREDICTED:_alpha-1,2-mannosyltransferase_ALG9_[Bombyx_mori]
GO:0000026 F alpha-1,2-mannosyltransferase activity
GO:0000030 F mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0052918 F dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity
GO:0052926 F dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity
GO:0097502 P mannosylation
FPKM:3.27 TPM:2.58
515 A_BomoMG_comp132536_c0_seq1
412bp
FPKM:2.95 TPM:2.33
516 A_BomoMG_comp132537_c0_seq1
853bp
FPKM:5.78 TPM:4.57
517 A_BomoMG_comp132555_c0_seq1
223bp
 cell-division_protein_FtsK_[Corynebacterium_diphtheriae_CDCE_8392]
FPKM:8.80 TPM:6.95
518 A_BomoMG_comp132562_c0_seq1
539bp
 PREDICTED:_uncharacterized_protein_LOC101743358_[Bombyx_mori]
FPKM:5.21 TPM:4.12
519 A_BomoMG_comp132566_c0_seq1
377bp
 hypothetical_protein_[Microbacterium_sp._Leaf436]
FPKM:6.47 TPM:5.11
520 A_BomoMG_comp132576_c0_seq1
414bp
FPKM:6.27 TPM:4.95
521 A_BomoMG_comp132578_c0_seq1
780bp
 hypothetical_protein_RR46_13726_[Papilio_xuthus]
FPKM:4.69 TPM:3.71
522 A_BomoMG_comp132588_c0_seq1
212bp
 hypothetical_protein_RMATCC62417_05771_[Rhizopus_microsporus]
FPKM:2.84 TPM:2.24
523 A_BomoMG_comp132608_c0_seq1
225bp
FPKM:3.81 TPM:3.01
524 A_BomoMG_comp132615_c0_seq1
500bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:4.53 TPM:3.58
525 A_BomoMG_comp132618_c0_seq1
213bp
 PREDICTED:_very_long-chain_specific_acyl-CoA_dehydrogenase,_mitochondrial_[Bombyx_mori]
FPKM:17.35 TPM:13.70
526 A_BomoMG_comp132635_c0_seq1
804bp
FPKM:6.50 TPM:5.13
527 A_BomoMG_comp132641_c0_seq1
867bp
 RuvB-like_helicase_1_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0000812 C Swr1 complex
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0010756 P positive regulation of plasminogen activation
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043140 F 3'-5' DNA helicase activity
GO:0043141 F 5'-3' DNA helicase activity
GO:0043234 C protein-containing complex
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0051301 P cell division
GO:0071339 C MLL1 complex
GO:2000269 P regulation of fibroblast apoptotic process
FPKM:3.04 TPM:2.40
528 A_BomoMG_comp132758_c0_seq1
309bp
FPKM:7.59 TPM:6.00
529 A_BomoMG_comp132795_c0_seq1
904bp
 benzoate_1,2-dioxygenase_large_subunit_[Polaromonas_glacialis]
FPKM:4.36 TPM:3.45
530 A_BomoMG_comp132809_c0_seq1
611bp
 PREDICTED:_uncharacterized_protein_LOC101736443_[Bombyx_mori]
FPKM:5.84 TPM:4.62
531 A_BomoMG_comp132826_c0_seq1
345bp
 hypothetical_protein_NEIELOOT_00739_[Neisseria_elongata_subsp._glycolytica_ATCC_29315]
FPKM:5.83 TPM:4.61
532 A_BomoMG_comp132898_c0_seq1
940bp
FPKM:3.60 TPM:2.85
533 A_BomoMG_comp132904_c0_seq1
490bp
FPKM:4.33 TPM:3.42
534 A_BomoMG_comp132928_c0_seq1
613bp
FPKM:5.18 TPM:4.09
535 A_BomoMG_comp132945_c0_seq1
565bp
 PREDICTED:_APOPT_family_protein_CG14806,_mitochondrial_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0043280 P positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0090200 P positive regulation of release of cytochrome c from mitochondria
GO:0097193 P intrinsic apoptotic signaling pathway
FPKM:4.27 TPM:3.37
536 A_BomoMG_comp132989_c0_seq1
385bp
 PREDICTED:_transportin-3-like_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0008139 F nuclear localization sequence binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031965 C nuclear membrane
GO:0035048 P obsolete splicing factor protein import into nucleus
GO:0042802 F identical protein binding
GO:0043231 C intracellular membrane-bounded organelle
FPKM:7.19 TPM:5.68
537 A_BomoMG_comp133023_c0_seq1
1808bp
 activator_of_90_kDa_heat_shock_protein_ATPase_homolog_1_[Bombyx_mori]
GO:0001671 F ATPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0006950 P response to stress
GO:0032781 P positive regulation of ATP-dependent activity
GO:0051087 F chaperone binding
GO:0070062 C extracellular exosome
FPKM:3.56 TPM:2.81
538 A_BomoMG_comp133102_c0_seq1
567bp
FPKM:2.30 TPM:1.82
539 A_BomoMG_comp133129_c0_seq1
594bp
 PREDICTED:_60S_ribosome_subunit_biogenesis_protein_NIP7_homolog_[Amyelois_transitella]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0042254 P ribosome biogenesis
GO:0042255 P ribosome assembly
FPKM:5.98 TPM:4.73
540 A_BomoMG_comp133132_c0_seq1
2213bp
 replication_protein_A1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005662 C DNA replication factor A complex
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0007052 P mitotic spindle organization
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048812 P neuron projection morphogenesis
FPKM:5.01 TPM:3.96
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