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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2911 A_BomoMG_comp185635_c0_seq1
601bp
FPKM:3.35 TPM:2.65
2912 A_BomoMG_comp18563_c0_seq1
861bp
 Exportin-7_[Papilio_machaon]
GO:0005049 F nuclear export signal receptor activity
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0015031 P protein transport
FPKM:2.08 TPM:1.64
2913 A_BomoMG_comp185647_c0_seq1
466bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:3.08 TPM:2.43
2914 A_BomoMG_comp18564_c0_seq1
389bp
 PREDICTED:_histone-lysine_N-methyltransferase_SETD1_[Bombyx_mori]
FPKM:1.54 TPM:1.21
2915 A_BomoMG_comp18564_c1_seq1
220bp
 PREDICTED:_histone-lysine_N-methyltransferase_SETD1_[Bombyx_mori]
FPKM:1.52 TPM:1.20
2916 A_BomoMG_comp185658_c0_seq1
244bp
FPKM:6.15 TPM:4.86
2917 A_BomoMG_comp18565_c0_seq1
292bp
FPKM:2.31 TPM:1.83
2918 A_BomoMG_comp18568_c0_seq1
562bp
FPKM:2.06 TPM:1.63
2919 A_BomoMG_comp185699_c0_seq1
606bp
 AraC_family_transcriptional_regulator_[Cytophagales_bacterium_B6]
FPKM:3.80 TPM:3.00
2920 A_BomoMG_comp18569_c0_seq1
626bp
FPKM:1.32 TPM:1.04
2921 A_BomoMG_comp185704_c0_seq1
530bp
 hypothetical_protein_POPTR_0010s13180g_[Populus_trichocarpa]
FPKM:5.04 TPM:3.99
2922 A_BomoMG_comp18570_c0_seq1
431bp
 hemolymph_protein_14_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
FPKM:1.70 TPM:1.34
2923 A_BomoMG_comp18570_c1_seq1
882bp
 hemolymph_protein_14_[Bombyx_mori]
GO:0003279 P cardiac septum development
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005905 C clathrin-coated pit
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007275 P multicellular organism development
GO:0008203 P cholesterol metabolic process
GO:0010875 P positive regulation of cholesterol efflux
GO:0014912 P negative regulation of smooth muscle cell migration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0032370 P positive regulation of lipid transport
GO:0032374 P regulation of cholesterol transport
GO:0032403 F protein-containing complex binding
GO:0032429 P regulation of phospholipase A2 activity
GO:0032956 P regulation of actin cytoskeleton organization
GO:0034185 F apolipoprotein binding
GO:0035909 P aorta morphogenesis
GO:0043235 C receptor complex
GO:0043277 P apoptotic cell clearance
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0060976 P coronary vasculature development
GO:0097242 P amyloid-beta clearance
GO:2000587 P negative regulation of platelet-derived growth factor receptor-beta signaling pathway
FPKM:1.97 TPM:1.56
2924 A_BomoMG_comp18571_c0_seq1
344bp
 PREDICTED:_uncharacterized_protein_LOC107171774_[Diuraphis_noxia]
FPKM:1.51 TPM:1.19
2925 A_BomoMG_comp18571_c1_seq1
236bp
 hypothetical_protein_LPMP_230610_[Leishmania_panamensis]
FPKM:1.26 TPM:0.99
2926 A_BomoMG_comp185726_c0_seq1
552bp
 PREDICTED:_histone-lysine_N-methyltransferase_SETD2_isoform_X2_[Bombyx_mori]
FPKM:3.49 TPM:2.75
2927 A_BomoMG_comp185738_c0_seq1
797bp
FPKM:2.74 TPM:2.17
2928 A_BomoMG_comp18573_c0_seq1
293bp
 hypothetical_protein_[Lactobacillus_kimbladii]
FPKM:1.79 TPM:1.41
2929 A_BomoMG_comp18573_c1_seq1
237bp
FPKM:3.73 TPM:2.94
2930 A_BomoMG_comp185755_c0_seq1
342bp
 hypothetical_protein_FOMPIDRAFT_1024617_[Fomitopsis_pinicola_FP-58527_SS1]
FPKM:2.10 TPM:1.66
2931 A_BomoMG_comp18575_c0_seq1
371bp
FPKM:1.99 TPM:1.58
2932 A_BomoMG_comp18577_c0_seq1
278bp
FPKM:2.28 TPM:1.80
2933 A_BomoMG_comp185781_c0_seq1
1406bp
 PREDICTED:_fibrillin-3-like_[Bombyx_mori]
GO:0001933 P negative regulation of protein phosphorylation
GO:0001968 F fibronectin binding
GO:0005178 F integrin binding
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005577 C fibrinogen complex
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0007162 P negative regulation of cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007566 P embryo implantation
GO:0008022 F protein C-terminus binding
GO:0010628 P positive regulation of gene expression
GO:0010952 P positive regulation of peptidase activity
GO:0016032 P viral process
GO:0016504 F peptidase activator activity
GO:0030198 P extracellular matrix organization
GO:0031012 C extracellular matrix
GO:0032403 F protein-containing complex binding
GO:0042802 F identical protein binding
GO:0048146 P positive regulation of fibroblast proliferation
GO:0070051 F fibrinogen binding
GO:0070062 C extracellular exosome
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
GO:0071953 C elastic fiber
GO:0072378 P blood coagulation, fibrin clot formation
GO:1900025 P negative regulation of substrate adhesion-dependent cell spreading
GO:1904188 P negative regulation of transformation of host cell by virus
GO:1904237 P positive regulation of substrate-dependent cell migration, cell attachment to substrate
GO:2000146 P negative regulation of cell motility
GO:2000647 P negative regulation of stem cell proliferation
GO:2001202 P negative regulation of transforming growth factor beta production
FPKM:1.65 TPM:1.30
2934 A_BomoMG_comp185791_c0_seq1
232bp
 half_transporter_ABCB_family_[Phytophthora_sojae]
FPKM:1.31 TPM:1.04
2935 A_BomoMG_comp185794_c0_seq1
521bp
 PREDICTED:_uncharacterized_protein_LOC101735855_[Bombyx_mori]
FPKM:2.98 TPM:2.36
2936 A_BomoMG_comp185796_c0_seq1
1572bp
 PREDICTED:_uncharacterized_protein_LOC101742325_[Bombyx_mori]
FPKM:3.25 TPM:2.57
2937 A_BomoMG_comp18579_c0_seq1
309bp
FPKM:2.53 TPM:2.00
2938 A_BomoMG_comp185809_c0_seq1
641bp
 Pyruvate_dehydrogenase_phosphatase_regulatory_subunit,_mitochondrial_[Papilio_xuthus]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.93 TPM:2.32
2939 A_BomoMG_comp18580_c0_seq1
650bp
 hypothetical_protein_RR48_04989_[Papilio_machaon]
FPKM:1.77 TPM:1.40
2940 A_BomoMG_comp18582_c0_seq1
421bp
FPKM:1.63 TPM:1.29
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