SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/43914
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2731 A_BomoMG_comp183417_c0_seq1
224bp
FPKM:0.97 TPM:0.76
2732 A_BomoMG_comp18345_c0_seq1
397bp
FPKM:2.98 TPM:2.35
2733 A_BomoMG_comp18345_c1_seq1
230bp
 dynein,_axonemal,_heavy_polypeptide_9,_isoform_CRA_e_[Homo_sapiens]
FPKM:2.24 TPM:1.77
2734 A_BomoMG_comp18348_c0_seq1
377bp
FPKM:1.62 TPM:1.28
2735 A_BomoMG_comp18349_c0_seq1
223bp
 PREDICTED:_CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase-like_isoform_X2_[Saccoglossus_kowalevskii]
FPKM:2.44 TPM:1.93
2736 A_BomoMG_comp18352_c0_seq1
302bp
 PREDICTED:_uncharacterized_protein_LOC105842641_[Bombyx_mori]
FPKM:2.16 TPM:1.71
2737 A_BomoMG_comp18358_c0_seq1
265bp
 PREDICTED:_major_allergen_Equ_c_1-like_[Equus_asinus]
FPKM:2.53 TPM:2.00
2738 A_BomoMG_comp183598_c0_seq1
345bp
FPKM:2.63 TPM:2.08
2739 A_BomoMG_comp18361_c0_seq1
319bp
FPKM:2.82 TPM:2.23
2740 A_BomoMG_comp18362_c0_seq1
207bp
 hypothetical_protein_PVIIG_04855_[Plasmodium_vivax_India_VII]
FPKM:1.84 TPM:1.45
2741 A_BomoMG_comp18363_c0_seq1
350bp
 PREDICTED:_uncharacterized_protein_LOC106135532_[Amyelois_transitella]
FPKM:2.02 TPM:1.59
2742 A_BomoMG_comp18364_c0_seq1
312bp
FPKM:1.58 TPM:1.25
2743 A_BomoMG_comp183656_c0_seq1
692bp
 putative_WOC_protein_[Danaus_plexippus]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007010 P cytoskeleton organization
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0022604 P regulation of cell morphogenesis
GO:0046872 F metal ion binding
FPKM:4.43 TPM:3.50
2744 A_BomoMG_comp18365_c0_seq1
652bp
FPKM:2.57 TPM:2.03
2745 A_BomoMG_comp18365_c1_seq1
335bp
 hypothetical_protein_AM324_06395_[Thorarchaeota_archaeon_SMTZ1-83]
FPKM:1.59 TPM:1.25
2746 A_BomoMG_comp18366_c0_seq1
343bp
FPKM:1.71 TPM:1.35
2747 A_BomoMG_comp18369_c0_seq1
478bp
FPKM:1.24 TPM:0.98
2748 A_BomoMG_comp18371_c0_seq1
412bp
 PREDICTED:_putative_disease_resistance_protein_RGA3_isoform_X1_[Populus_euphratica]
FPKM:0.84 TPM:0.67
2749 A_BomoMG_comp18372_c0_seq1
244bp
FPKM:2.31 TPM:1.82
2750 A_BomoMG_comp18374_c0_seq1
303bp
 PREDICTED:_polycomb_protein_PHO-like_isoform_X1_[Bombyx_mori]
FPKM:2.15 TPM:1.70
2751 A_BomoMG_comp18375_c0_seq1
310bp
FPKM:2.29 TPM:1.81
2752 A_BomoMG_comp18376_c0_seq1
619bp
FPKM:1.50 TPM:1.18
2753 A_BomoMG_comp18377_c0_seq1
382bp
FPKM:1.58 TPM:1.25
2754 A_BomoMG_comp18378_c0_seq1
239bp
FPKM:3.24 TPM:2.56
2755 A_BomoMG_comp18379_c0_seq1
249bp
FPKM:1.46 TPM:1.16
2756 A_BomoMG_comp18380_c0_seq1
324bp
 serpin-24_[Bombyx_mori]
FPKM:1.26 TPM:1.00
2757 A_BomoMG_comp18382_c0_seq1
301bp
 hikaru_genki_[Bombyx_mori]
FPKM:1.21 TPM:0.96
2758 A_BomoMG_comp18384_c0_seq1
331bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.42 TPM:1.12
2759 A_BomoMG_comp18386_c0_seq1
342bp
 Uncharacterized_oxidoreductase_ORF334_[Curvibacter_putative_symbiont_of_Hydra_magnipapillata]
FPKM:1.72 TPM:1.36
2760 A_BomoMG_comp18387_c0_seq1
223bp
 cytochrome_c_oxidase_subunit_I,_partial_(mitochondrion)_[Pigritia_sp._1_SRB-2005]
GO:0004129 F cytochrome-c oxidase activity
GO:0005506 F iron ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006119 P oxidative phosphorylation
GO:0009055 F electron transfer activity
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
GO:1902600 P proton transmembrane transport
FPKM:0.49 TPM:0.39
previous next from show/43914

- SilkBase 1999-2023 -