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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2581 A_BomoMG_comp18167_c0_seq1
226bp
FPKM:2.82 TPM:2.23
2582 A_BomoMG_comp181683_c0_seq1
831bp
FPKM:2.50 TPM:1.97
2583 A_BomoMG_comp18170_c0_seq1
250bp
FPKM:2.54 TPM:2.00
2584 A_BomoMG_comp181718_c0_seq1
283bp
 sulfite_reductase_[Acinetobacter_johnsonii]
FPKM:2.19 TPM:1.73
2585 A_BomoMG_comp18171_c0_seq1
225bp
FPKM:0.00 TPM:0.00
2586 A_BomoMG_comp18171_c0_seq2
224bp
FPKM:1.45 TPM:1.14
2587 A_BomoMG_comp18172_c0_seq1
382bp
 putative_pol-like_protein,_partial_[Operophtera_brumata]
FPKM:1.43 TPM:1.13
2588 A_BomoMG_comp18174_c0_seq1
372bp
 PREDICTED:_slit_homolog_3_protein-like_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0002229 P defense response to oomycetes
GO:0002376 P immune system process
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0007416 P synapse assembly
GO:0007507 P heart development
GO:0008063 P Toll signaling pathway
GO:0009617 P response to bacterium
GO:0009620 P response to fungus
GO:0009880 P embryonic pattern specification
GO:0009897 C external side of plasma membrane
GO:0009950 P dorsal/ventral axis specification
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016201 P synaptic target inhibition
GO:0019730 P antimicrobial humoral response
GO:0019732 P antifungal humoral response
GO:0019955 F cytokine binding
GO:0030097 P hemopoiesis
GO:0032154 C cleavage furrow
GO:0035007 P regulation of melanization defense response
GO:0035172 P hemocyte proliferation
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045087 P innate immune response
GO:0045610 P regulation of hemocyte differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050830 P defense response to Gram-positive bacterium
GO:0050832 P defense response to fungus
GO:0070976 F TIR domain binding
GO:1902875 P regulation of embryonic pattern specification
FPKM:1.49 TPM:1.18
2589 A_BomoMG_comp18175_c0_seq1
299bp
 PREDICTED:_anaphase-promoting_complex_subunit_2_[Papilio_polytes]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005680 C anaphase-promoting complex
GO:0005829 C cytosol
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007399 P nervous system development
GO:0016567 P protein ubiquitination
GO:0030154 P cell differentiation
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0031625 F ubiquitin protein ligase binding
GO:0031915 P positive regulation of synaptic plasticity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045773 P positive regulation of axon extension
GO:0050775 P positive regulation of dendrite morphogenesis
GO:0051301 P cell division
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0051439 P obsolete regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0061630 F ubiquitin protein ligase activity
GO:0070979 P protein K11-linked ubiquitination
GO:0090129 P positive regulation of synapse maturation
FPKM:2.21 TPM:1.74
2590 A_BomoMG_comp18178_c0_seq1
201bp
 PREDICTED:_protein_SHQ1_homolog_[Plutella_xylostella]
FPKM:3.37 TPM:2.66
2591 A_BomoMG_comp18181_c0_seq1
371bp
 reverse_transcriptase,_partial_[Scopula_ornata]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.50 TPM:1.18
2592 A_BomoMG_comp181821_c0_seq1
453bp
 PREDICTED:_inactive_hydroxysteroid_dehydrogenase-like_protein_1_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:4.37 TPM:3.46
2593 A_BomoMG_comp18182_c0_seq1
405bp
FPKM:1.87 TPM:1.48
2594 A_BomoMG_comp18183_c0_seq1
207bp
FPKM:3.67 TPM:2.90
2595 A_BomoMG_comp18186_c0_seq1
362bp
FPKM:1.56 TPM:1.23
2596 A_BomoMG_comp18187_c0_seq1
430bp
 hypothetical_protein_NAEGRDRAFT_74906_[Naegleria_gruberi]
FPKM:1.97 TPM:1.56
2597 A_BomoMG_comp18188_c0_seq1
458bp
 PREDICTED:_collagen_alpha_chain_CG42342-like_isoform_X7_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005581 C collagen trimer
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:1.20 TPM:0.94
2598 A_BomoMG_comp1818_c0_seq1
215bp
 Uncharacterized_protein_OBRU01_01856_[Operophtera_brumata]
FPKM:0.54 TPM:0.43
2599 A_BomoMG_comp18191_c0_seq1
334bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.39 TPM:1.89
2600 A_BomoMG_comp18193_c0_seq1
253bp
FPKM:2.46 TPM:1.95
2601 A_BomoMG_comp18194_c0_seq1
227bp
FPKM:2.79 TPM:2.20
2602 A_BomoMG_comp181965_c0_seq1
512bp
 PREDICTED:_uncharacterized_protein_LOC101742795_[Bombyx_mori]
FPKM:3.46 TPM:2.74
2603 A_BomoMG_comp18196_c0_seq1
687bp
FPKM:1.93 TPM:1.52
2604 A_BomoMG_comp18197_c0_seq1
216bp
 PREDICTED:_coagulation_factor_XI-like_[Larimichthys_crocea]
FPKM:3.22 TPM:2.54
2605 A_BomoMG_comp18197_c1_seq1
206bp
FPKM:1.24 TPM:0.98
2606 A_BomoMG_comp18198_c0_seq1
251bp
 H3K9_methyltransferase-like_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0000976 F transcription cis-regulatory region binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030154 P cell differentiation
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0036123 P histone H3-K9 dimethylation
GO:0036124 P histone H3-K9 trimethylation
GO:0042754 P negative regulation of circadian rhythm
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
FPKM:1.79 TPM:1.42
2607 A_BomoMG_comp18199_c0_seq1
438bp
FPKM:1.79 TPM:1.41
2608 A_BomoMG_comp18199_c1_seq1
475bp
FPKM:2.04 TPM:1.61
2609 A_BomoMG_comp18200_c0_seq1
248bp
 alpha/beta_hydrolase_[Halomonas_sp._GFAJ-1]
FPKM:2.22 TPM:1.75
2610 A_BomoMG_comp182010_c0_seq1
1135bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_19_[Plutella_xylostella]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:3.64 TPM:2.88
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