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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2551 A_BomoMG_comp18131_c0_seq1
436bp
 Nuclear_pore_complex_protein_Nup133_[Papilio_xuthus]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000940 C outer kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006999 P nuclear pore organization
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017056 F structural constituent of nuclear pore
GO:0021915 P neural tube development
GO:0022008 P neurogenesis
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0048339 P paraxial mesoderm development
GO:0051028 P mRNA transport
GO:0061053 P somite development
FPKM:1.54 TPM:1.22
2552 A_BomoMG_comp181328_c0_seq1
986bp
 geminin_[Bombyx_mori]
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006275 P regulation of DNA replication
GO:0006461 P protein-containing complex assembly
GO:0007049 P cell cycle
GO:0008156 P negative regulation of DNA replication
GO:0009887 P animal organ morphogenesis
GO:0042826 F histone deacetylase binding
GO:0045786 P negative regulation of cell cycle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070491 F DNA-binding transcription factor binding
FPKM:3.10 TPM:2.45
2553 A_BomoMG_comp18132_c0_seq1
204bp
 uncharacterized_protein_Dyak_GE13409_[Drosophila_yakuba]
FPKM:3.85 TPM:3.04
2554 A_BomoMG_comp18133_c0_seq1
208bp
 hypothetical_protein_Z520_05657_[Fonsecaea_multimorphosa_CBS_102226]
FPKM:3.62 TPM:2.86
2555 A_BomoMG_comp18134_c0_seq1
208bp
FPKM:0.60 TPM:0.48
2556 A_BomoMG_comp181358_c0_seq1
435bp
FPKM:3.23 TPM:2.55
2557 A_BomoMG_comp18137_c0_seq1
417bp
FPKM:1.65 TPM:1.31
2558 A_BomoMG_comp181382_c0_seq1
288bp
FPKM:2.12 TPM:1.67
2559 A_BomoMG_comp18139_c0_seq1
429bp
FPKM:2.11 TPM:1.67
2560 A_BomoMG_comp18140_c0_seq1
309bp
FPKM:2.30 TPM:1.82
2561 A_BomoMG_comp18141_c0_seq1
274bp
 PREDICTED:_protein_ZBED8-like_[Parasteatoda_tepidariorum]
FPKM:2.35 TPM:1.86
2562 A_BomoMG_comp18144_c0_seq1
272bp
FPKM:3.88 TPM:3.07
2563 A_BomoMG_comp18147_c0_seq1
464bp
 Uncharacterized_protein_OBRU01_10407_[Operophtera_brumata]
FPKM:2.35 TPM:1.85
2564 A_BomoMG_comp18148_c0_seq1
391bp
FPKM:2.13 TPM:1.69
2565 A_BomoMG_comp18149_c0_seq1
481bp
 putative_formin_1,2/cappuccino_[Danaus_plexippus]
FPKM:1.78 TPM:1.41
2566 A_BomoMG_comp18149_c1_seq1
340bp
 Protein_cappuccino_[Papilio_xuthus]
FPKM:2.70 TPM:2.13
2567 A_BomoMG_comp181521_c0_seq1
286bp
 PREDICTED:_probable_tRNA_(uracil-O(2)-)-methyltransferase,_partial_[Bombyx_mori]
FPKM:2.15 TPM:1.70
2568 A_BomoMG_comp18152_c0_seq1
431bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:1.44 TPM:1.14
2569 A_BomoMG_comp18153_c0_seq1
203bp
FPKM:2.61 TPM:2.06
2570 A_BomoMG_comp181549_c0_seq1
519bp
FPKM:1.90 TPM:1.50
2571 A_BomoMG_comp18155_c0_seq1
274bp
FPKM:2.64 TPM:2.09
2572 A_BomoMG_comp18155_c1_seq1
426bp
 SCP-related_protein_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
FPKM:1.60 TPM:1.26
2573 A_BomoMG_comp18157_c0_seq1
393bp
 PREDICTED:_E3_ubiquitin-protein_ligase_TRIM9_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0010976 P positive regulation of neuron projection development
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
GO:2000060 P positive regulation of ubiquitin-dependent protein catabolic process
FPKM:3.03 TPM:2.39
2574 A_BomoMG_comp18157_c1_seq1
284bp
 PREDICTED:_E3_ubiquitin-protein_ligase_TRIM9_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008021 C synaptic vesicle
GO:0008270 F zinc ion binding
GO:0016079 P synaptic vesicle exocytosis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0035544 P negative regulation of SNARE complex assembly
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045202 C synapse
GO:0045955 P negative regulation of calcium ion-dependent exocytosis
GO:0046872 F metal ion binding
FPKM:2.45 TPM:1.94
2575 A_BomoMG_comp18158_c0_seq1
353bp
 calcium_and_integrin_binding_protein_CIB_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0030027 C lamellipodium
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0032433 C filopodium tip
GO:0032587 C ruffle membrane
GO:0042383 C sarcolemma
GO:0042995 C cell projection
GO:0048471 C perinuclear region of cytoplasm
GO:0051301 P cell division
FPKM:1.99 TPM:1.57
2576 A_BomoMG_comp18159_c0_seq1
255bp
 PREDICTED:_uncharacterized_protein_LOC101746233_[Bombyx_mori]
FPKM:0.35 TPM:0.27
2577 A_BomoMG_comp18160_c0_seq1
466bp
FPKM:1.05 TPM:0.83
2578 A_BomoMG_comp18162_c0_seq1
289bp
FPKM:1.58 TPM:1.25
2579 A_BomoMG_comp18163_c0_seq1
556bp
 PREDICTED:_UDP-sugar_transporter_UST74c_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0001745 P compound eye morphogenesis
GO:0005457 F GDP-fucose transmembrane transporter activity
GO:0005458 F GDP-mannose transmembrane transporter activity
GO:0005459 F UDP-galactose transmembrane transporter activity
GO:0005460 F UDP-glucose transmembrane transporter activity
GO:0005461 F UDP-glucuronic acid transmembrane transporter activity
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 F UDP-xylose transmembrane transporter activity
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0006810 P transport
GO:0007220 P Notch receptor processing
GO:0007367 P segment polarity determination
GO:0007423 P sensory organ development
GO:0007447 P imaginal disc pattern formation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008643 P carbohydrate transport
GO:0009880 P embryonic pattern specification
GO:0015165 F pyrimidine nucleotide-sugar transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015781 P pyrimidine nucleotide-sugar transmembrane transport
GO:0015785 P UDP-galactose transmembrane transport
GO:0015786 P UDP-glucose transmembrane transport
GO:0015787 P UDP-glucuronic acid transmembrane transport
GO:0015788 P UDP-N-acetylglucosamine transmembrane transport
GO:0015790 P UDP-xylose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:0072334 P UDP-galactose transmembrane transport
GO:0090481 P pyrimidine nucleotide-sugar transmembrane transport
GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
FPKM:1.73 TPM:1.36
2580 A_BomoMG_comp181661_c0_seq1
1151bp
 PREDICTED:_putative_pre-mRNA-splicing_factor_ATP-dependent_RNA_helicase_DHX16_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007281 P germ cell development
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0010172 P embryonic body morphogenesis
GO:0016787 F hydrolase activity
GO:0040022 P feminization of hermaphroditic germ-line
GO:0044822 F RNA binding
GO:0048589 P developmental growth
FPKM:2.73 TPM:2.16
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