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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2491 A_BomoMG_comp180619_c0_seq1
829bp
 hypothetical_protein_RR46_03775_[Papilio_xuthus]
FPKM:1.36 TPM:1.07
2492 A_BomoMG_comp18061_c0_seq1
262bp
FPKM:1.95 TPM:1.54
2493 A_BomoMG_comp180628_c0_seq1
299bp
FPKM:2.70 TPM:2.13
2494 A_BomoMG_comp18062_c0_seq1
884bp
 PREDICTED:_arylsulfatase_I_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003943 F N-acetylgalactosamine-4-sulfatase activity
GO:0004065 F arylsulfatase activity
GO:0005764 C lysosome
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0009986 C cell surface
GO:0010632 P regulation of epithelial cell migration
GO:0010976 P positive regulation of neuron projection development
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0061580 P colon epithelial cell migration
GO:0070062 C extracellular exosome
FPKM:2.01 TPM:1.59
2495 A_BomoMG_comp18062_c1_seq1
241bp
 PREDICTED:_arylsulfatase_B-like,_partial_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0003943 F N-acetylgalactosamine-4-sulfatase activity
GO:0005764 C lysosome
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0009986 C cell surface
GO:0010632 P regulation of epithelial cell migration
GO:0010976 P positive regulation of neuron projection development
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0061580 P colon epithelial cell migration
FPKM:1.98 TPM:1.57
2496 A_BomoMG_comp18063_c0_seq1
813bp
 PREDICTED:_zinc_finger_protein_37A-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.56 TPM:1.23
2497 A_BomoMG_comp18064_c0_seq1
429bp
FPKM:1.45 TPM:1.15
2498 A_BomoMG_comp18065_c0_seq1
287bp
FPKM:1.60 TPM:1.26
2499 A_BomoMG_comp18066_c0_seq1
455bp
 PREDICTED:_importin-13_[Bombyx_mori]
GO:0002147 P obsolete glucocorticoid receptor import into nucleus
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008139 F nuclear localization sequence binding
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031965 C nuclear membrane
GO:0035259 F glucocorticoid receptor binding
GO:0042564 C NLS-dependent protein nuclear import complex
FPKM:2.29 TPM:1.81
2500 A_BomoMG_comp18067_c0_seq1
307bp
 hypothetical_protein_KGM_08042_[Danaus_plexippus]
FPKM:1.63 TPM:1.29
2501 A_BomoMG_comp18067_c1_seq1
376bp
 RNA-binding_protein_45_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008150 P biological_process
GO:0030154 P cell differentiation
GO:0044822 F RNA binding
FPKM:1.79 TPM:1.42
2502 A_BomoMG_comp18068_c0_seq1
321bp
FPKM:1.93 TPM:1.52
2503 A_BomoMG_comp180695_c0_seq1
216bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:3.75 TPM:2.97
2504 A_BomoMG_comp18070_c0_seq1
227bp
 PREDICTED:_WD_repeat_domain_phosphoinositide-interacting_protein_4-like_[Papilio_machaon]
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0005829 C cytosol
GO:0006497 P protein lipidation
GO:0019898 C extrinsic component of membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0034045 C phagophore assembly site membrane
GO:0034497 P protein localization to phagophore assembly site
GO:0044804 P autophagy of nucleus
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
FPKM:3.72 TPM:2.94
2505 A_BomoMG_comp18071_c0_seq1
420bp
 RNA-directed_RNA_polymerase_L_[Papilio_machaon]
FPKM:1.91 TPM:1.51
2506 A_BomoMG_comp18073_c0_seq1
407bp
 hypothetical_protein_[Ruminococcus_sp._FC2018]
FPKM:2.43 TPM:1.92
2507 A_BomoMG_comp18075_c0_seq1
211bp
 head-tail_adaptor_protein_[Mannheimia_granulomatis]
FPKM:1.15 TPM:0.91
2508 A_BomoMG_comp18076_c0_seq1
260bp
 PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_CWC27_homolog_isoform_X1_[Bombyx_mori]
GO:0000506 C glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex
GO:0003824 F catalytic activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016254 P preassembly of GPI anchor in ER membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0017176 F phosphatidylinositol N-acetylglucosaminyltransferase activity
FPKM:3.63 TPM:2.87
2509 A_BomoMG_comp18078_c0_seq1
246bp
FPKM:2.64 TPM:2.08
2510 A_BomoMG_comp180810_c0_seq1
664bp
 putative_Pentatricopeptide_repeat_domain_containing_protein,_partial_[Klebsormidium_flaccidum]
FPKM:2.30 TPM:1.82
2511 A_BomoMG_comp18082_c0_seq1
329bp
FPKM:2.05 TPM:1.62
2512 A_BomoMG_comp180832_c0_seq1
962bp
FPKM:3.05 TPM:2.41
2513 A_BomoMG_comp18083_c0_seq1
488bp
 tRNA-specific_adenosine_deaminase_[Acinetobacter_baumannii]
FPKM:1.96 TPM:1.55
2514 A_BomoMG_comp18083_c1_seq1
217bp
 hypothetical_protein_[Staphylococcus_sp._NAM3COL9]
FPKM:2.12 TPM:1.67
2515 A_BomoMG_comp18084_c0_seq1
510bp
 PREDICTED:_sex_determination_protein_fruitless-like_isoform_X1_[Bombyx_mori]
FPKM:2.15 TPM:1.70
2516 A_BomoMG_comp18084_c1_seq1
300bp
 PREDICTED:_sex_determination_protein_fruitless-like_isoform_X3_[Bombyx_mori]
FPKM:1.95 TPM:1.54
2517 A_BomoMG_comp180850_c0_seq1
292bp
FPKM:4.89 TPM:3.86
2518 A_BomoMG_comp180860_c0_seq1
288bp
 acetyltransferase_[Acidovorax_sp._Root219]
FPKM:3.70 TPM:2.93
2519 A_BomoMG_comp18089_c0_seq1
439bp
 PREDICTED:_uncharacterized_protein_LOC101742417_[Bombyx_mori]
GO:0001750 C photoreceptor outer segment
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006886 P intracellular protein transport
GO:0007601 P visual perception
GO:0030030 P cell projection organization
GO:0036064 C ciliary basal body
GO:0036126 C sperm flagellum
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
GO:0044822 F RNA binding
GO:0050896 P response to stimulus
GO:0072372 C cilium
FPKM:1.53 TPM:1.21
2520 A_BomoMG_comp180911_c0_seq1
807bp
 PREDICTED:_neuroguidin_[Papilio_polytes]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000775 C chromosome, centromeric region
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0030175 C filopodium
GO:0030424 C axon
GO:0030425 C dendrite
GO:0032040 C small-subunit processome
GO:0042995 C cell projection
GO:0044822 F RNA binding
FPKM:2.64 TPM:2.09
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