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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2461 A_BomoMG_comp180177_c0_seq1
540bp
 PREDICTED:_cAMP-responsive_element-binding_protein-like_2_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030154 P cell differentiation
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0043565 F sequence-specific DNA binding
GO:0045600 P positive regulation of fat cell differentiation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046326 P positive regulation of glucose import
GO:0046889 P positive regulation of lipid biosynthetic process
GO:0050821 P protein stabilization
FPKM:4.16 TPM:3.29
2462 A_BomoMG_comp18017_c0_seq1
317bp
FPKM:2.41 TPM:1.91
2463 A_BomoMG_comp18019_c0_seq1
215bp
 hypothetical_protein_KGM_21749_[Danaus_plexippus]
FPKM:0.54 TPM:0.43
2464 A_BomoMG_comp18020_c0_seq1
631bp
 PREDICTED:_polyhomeotic_isoform_X2_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006342 P heterochromatin assembly
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0016458 P obsolete gene silencing
GO:0021954 P central nervous system neuron development
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030713 P ovarian follicle cell stalk formation
GO:0035075 P response to ecdysone
GO:0035102 C PRC1 complex
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0044547 F DNA topoisomerase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051087 F chaperone binding
FPKM:1.23 TPM:0.97
2465 A_BomoMG_comp180217_c0_seq1
1590bp
FPKM:2.54 TPM:2.01
2466 A_BomoMG_comp180218_c0_seq1
337bp
 MFS_transporter_[Pectobacterium_carotovorum]
FPKM:4.71 TPM:3.72
2467 A_BomoMG_comp18022_c0_seq1
237bp
 RNA_m5u_methyltransferase_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0001510 P RNA methylation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0006396 P RNA processing
GO:0008168 F methyltransferase activity
GO:0008173 F RNA methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
FPKM:2.90 TPM:2.29
2468 A_BomoMG_comp180239_c0_seq1
372bp
FPKM:4.14 TPM:3.27
2469 A_BomoMG_comp18024_c0_seq1
368bp
 PREDICTED:_uncharacterized_protein_LOC106141912,_partial_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.52 TPM:1.20
2470 A_BomoMG_comp18027_c0_seq1
209bp
 PREDICTED:_putative_leucine-rich_repeat-containing_protein_DDB_G0290503_[Bombyx_mori]
FPKM:4.15 TPM:3.28
2471 A_BomoMG_comp18028_c0_seq1
636bp
FPKM:1.37 TPM:1.08
2472 A_BomoMG_comp18028_c1_seq1
1711bp
 PREDICTED:_uncharacterized_protein_LOC101742065_isoform_X2_[Bombyx_mori]
FPKM:2.02 TPM:1.59
2473 A_BomoMG_comp18029_c0_seq1
227bp
FPKM:1.86 TPM:1.47
2474 A_BomoMG_comp18030_c0_seq1
247bp
FPKM:2.61 TPM:2.06
2475 A_BomoMG_comp18035_c0_seq1
273bp
PREDICTED:_trypsin-like_serine_protease_isoform_X1_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0007596 P blood coagulation
GO:0007599 P hemostasis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0042730 P fibrinolysis
FPKM:2.07 TPM:1.64
2476 A_BomoMG_comp18038_c0_seq1
281bp
 PREDICTED:_cationic_amino_acid_transporter_3_[Plutella_xylostella]
FPKM:2.23 TPM:1.76
2477 A_BomoMG_comp18039_c0_seq1
715bp
 PREDICTED:_uncharacterized_protein_LOC106105849_[Papilio_polytes]
FPKM:1.63 TPM:1.29
2478 A_BomoMG_comp180410_c0_seq1
433bp
FPKM:3.38 TPM:2.67
2479 A_BomoMG_comp18041_c0_seq1
240bp
FPKM:2.41 TPM:1.90
2480 A_BomoMG_comp180426_c0_seq1
620bp
FPKM:2.59 TPM:2.05
2481 A_BomoMG_comp18043_c0_seq1
571bp
FPKM:2.41 TPM:1.91
2482 A_BomoMG_comp18043_c1_seq1
317bp
 peptidase_S15_[Aestuariivita_boseongensis]
FPKM:2.19 TPM:1.73
2483 A_BomoMG_comp18047_c0_seq1
246bp
 PREDICTED:_uncharacterized_protein_LOC101741591_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006355 P regulation of transcription, DNA-templated
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:3.01 TPM:2.38
2484 A_BomoMG_comp18048_c0_seq1
391bp
 PREDICTED:_GPI_mannosyltransferase_4_isoform_X1_[Bombyx_mori]
GO:0000026 F alpha-1,2-mannosyltransferase activity
GO:0000030 F mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0097502 P mannosylation
FPKM:1.68 TPM:1.33
2485 A_BomoMG_comp180494_c0_seq1
512bp
 PREDICTED:_ATP-binding_cassette_sub-family_A_member_3-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0051384 P response to glucocorticoid
GO:0055085 P transmembrane transport
GO:0097208 C alveolar lamellar body
GO:0097233 C alveolar lamellar body membrane
FPKM:4.68 TPM:3.70
2486 A_BomoMG_comp180519_c0_seq1
510bp
FPKM:4.61 TPM:3.64
2487 A_BomoMG_comp18053_c0_seq1
240bp
FPKM:3.21 TPM:2.53
2488 A_BomoMG_comp18054_c0_seq1
299bp
 hypothetical_protein_KGM_08685_[Danaus_plexippus]
FPKM:2.70 TPM:2.13
2489 A_BomoMG_comp18055_c0_seq1
300bp
FPKM:1.46 TPM:1.16
2490 A_BomoMG_comp18057_c0_seq1
240bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:2.00 TPM:1.58
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