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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1861 A_BomoMG_comp17435_c0_seq1
1299bp
 PREDICTED:_receptor-mediated_endocytosis_protein_6_homolog_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0032794 F GTPase activating protein binding
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0051223 P regulation of protein transport
FPKM:2.32 TPM:1.83
1862 A_BomoMG_comp174365_c0_seq1
470bp
FPKM:4.83 TPM:3.82
1863 A_BomoMG_comp17436_c0_seq1
477bp
 KR_domain-containing_protein_[Colletotrichum_gloeosporioides_Cg-14]
FPKM:1.91 TPM:1.51
1864 A_BomoMG_comp17436_c1_seq1
429bp
FPKM:3.43 TPM:2.71
1865 A_BomoMG_comp17437_c0_seq1
298bp
 PREDICTED:_tumor_protein_p63-regulated_gene_1-like_protein_isoform_X3_[Bombyx_mori]
FPKM:4.45 TPM:3.51
1866 A_BomoMG_comp17437_c0_seq2
250bp
 PREDICTED:_tumor_protein_p63-regulated_gene_1-like_protein_isoform_X3_[Bombyx_mori]
GO:0008021 C synaptic vesicle
GO:0030054 C cell junction
GO:0031410 C cytoplasmic vesicle
GO:0042802 F identical protein binding
GO:0045202 C synapse
GO:0070062 C extracellular exosome
FPKM:0.72 TPM:0.57
1867 A_BomoMG_comp174384_c0_seq1
715bp
FPKM:3.20 TPM:2.53
1868 A_BomoMG_comp17438_c0_seq1
1089bp
 PREDICTED:_microtubule-associated_protein_futsch_[Amyelois_transitella]
FPKM:2.21 TPM:1.74
1869 A_BomoMG_comp17439_c0_seq1
245bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_DNA_replication_licensing_factor_Mcm6-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007307 P eggshell chorion gene amplification
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
GO:0046331 P lateral inhibition
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0051301 P cell division
FPKM:4.19 TPM:3.31
1870 A_BomoMG_comp17441_c0_seq1
305bp
FPKM:4.96 TPM:3.91
1871 A_BomoMG_comp17442_c0_seq1
249bp
 hypothetical_protein_H072_8361_[Dactylellina_haptotyla_CBS_200.50]
FPKM:1.83 TPM:1.44
1872 A_BomoMG_comp17443_c0_seq1
344bp
 PREDICTED:_uncharacterized_protein_LOC106108499_[Papilio_polytes]
FPKM:3.02 TPM:2.39
1873 A_BomoMG_comp17445_c0_seq1
1470bp
 Membrane-bound_alkaline_phosphatase_[Papilio_xuthus]
GO:0003824 F catalytic activity
GO:0004035 F alkaline phosphatase activity
GO:0005886 C plasma membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0031225 C anchored component of membrane
GO:0046872 F metal ion binding
FPKM:2.10 TPM:1.66
1874 A_BomoMG_comp17447_c0_seq1
271bp
 PREDICTED:_uncharacterized_protein_LOC106129371_[Amyelois_transitella]
FPKM:3.61 TPM:2.85
1875 A_BomoMG_comp17448_c0_seq1
438bp
 CCHamide_precursor_[Bombyx_mori]
FPKM:2.68 TPM:2.12
1876 A_BomoMG_comp17449_c0_seq1
302bp
 histidine_kinase_[Bacillus_sp._FJAT-25547]
FPKM:3.61 TPM:2.85
1877 A_BomoMG_comp174524_c0_seq1
227bp
FPKM:2.79 TPM:2.20
1878 A_BomoMG_comp17453_c0_seq1
612bp
FPKM:2.40 TPM:1.89
1879 A_BomoMG_comp17454_c0_seq1
529bp
 PREDICTED:_protein_FAM32A-like_[Plutella_xylostella]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
FPKM:2.63 TPM:2.08
1880 A_BomoMG_comp17455_c0_seq1
324bp
FPKM:1.89 TPM:1.50
1881 A_BomoMG_comp17456_c0_seq1
564bp
 PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
FPKM:2.85 TPM:2.25
1882 A_BomoMG_comp174575_c0_seq1
853bp
 PREDICTED:_muskelin_[Papilio_machaon]
GO:0001726 C ruffle
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005938 C cell cortex
GO:0007160 P cell-matrix adhesion
GO:0008360 P regulation of cell shape
GO:0031532 P actin cytoskeleton reorganization
GO:0042995 C cell projection
FPKM:3.21 TPM:2.53
1883 A_BomoMG_comp17457_c0_seq1
335bp
FPKM:3.37 TPM:2.66
1884 A_BomoMG_comp174580_c0_seq1
1958bp
 PREDICTED:_nucleolar_protein_6_[Amyelois_transitella]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
FPKM:2.27 TPM:1.80
1885 A_BomoMG_comp17458_c0_seq1
1041bp
 PREDICTED:_PWWP_domain-containing_protein_2A-like_[Amyelois_transitella]
FPKM:2.45 TPM:1.93
1886 A_BomoMG_comp17460_c0_seq1
599bp
FPKM:2.22 TPM:1.75
1887 A_BomoMG_comp17461_c0_seq1
255bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13D_[Bombyx_mori]
FPKM:4.84 TPM:3.82
1888 A_BomoMG_comp17462_c0_seq1
804bp
 PREDICTED:_uncharacterized_protein_LOC105383992_[Plutella_xylostella]
FPKM:2.20 TPM:1.74
1889 A_BomoMG_comp17462_c1_seq1
410bp
 PREDICTED:_zinc_finger_protein_236-like_[Amyelois_transitella]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0008584 P male gonad development
GO:0010468 P regulation of gene expression
GO:0030217 P T cell differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
FPKM:1.84 TPM:1.45
1890 A_BomoMG_comp174636_c0_seq1
604bp
 PREDICTED:_receptor-mediated_endocytosis_protein_6_homolog_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005829 C cytosol
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0032483 P regulation of Rab protein signal transduction
GO:0032794 F GTPase activating protein binding
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0051223 P regulation of protein transport
FPKM:3.74 TPM:2.95
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