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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1621 A_BomoMG_comp17197_c0_seq1
260bp
 PREDICTED:_luciferin_4-monooxygenase-like_[Plutella_xylostella]
FPKM:0.99 TPM:0.78
1622 A_BomoMG_comp171993_c0_seq1
208bp
FPKM:7.23 TPM:5.71
1623 A_BomoMG_comp172005_c0_seq1
520bp
FPKM:2.19 TPM:1.73
1624 A_BomoMG_comp17200_c0_seq1
240bp
 PREDICTED:_uncharacterized_protein_LOC101746752_isoform_X2_[Bombyx_mori]
FPKM:2.81 TPM:2.22
1625 A_BomoMG_comp17200_c1_seq1
289bp
 PREDICTED:_uncharacterized_protein_LOC101746752_isoform_X2_[Bombyx_mori]
FPKM:3.15 TPM:2.49
1626 A_BomoMG_comp17203_c0_seq1
285bp
 PREDICTED:_zinc_finger_protein_2_homolog_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
FPKM:2.70 TPM:2.14
1627 A_BomoMG_comp172045_c0_seq1
1434bp
 PREDICTED:_putative_E3_ubiquitin-protein_ligase_UBR7_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
FPKM:2.97 TPM:2.35
1628 A_BomoMG_comp17204_c0_seq1
659bp
 PREDICTED:_solute_carrier_family_22_member_3-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005329 F dopamine:sodium symporter activity
GO:0005515 F protein binding
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015101 F organic cation transmembrane transporter activity
GO:0015651 F quaternary ammonium group transmembrane transporter activity
GO:0015695 P organic cation transport
GO:0015697 P quaternary ammonium group transport
GO:0015844 P monoamine transport
GO:0015872 P dopamine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019534 F toxin transmembrane transporter activity
GO:0022857 F transmembrane transporter activity
GO:0032098 P regulation of appetite
GO:0051608 P histamine transport
GO:0051615 P histamine uptake
GO:0055085 P transmembrane transport
GO:0072488 P ammonium transmembrane transport
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:1901998 P toxin transport
FPKM:2.03 TPM:1.60
1629 A_BomoMG_comp17205_c0_seq1
548bp
FPKM:1.58 TPM:1.24
1630 A_BomoMG_comp172067_c0_seq1
786bp
FPKM:2.21 TPM:1.74
1631 A_BomoMG_comp17206_c0_seq1
426bp
 hypothetical_protein_[Providencia_rettgeri]
FPKM:1.87 TPM:1.47
1632 A_BomoMG_comp17208_c0_seq1
240bp
 hypothetical_protein_[Burkholderia_sp._UYPR1.413]
FPKM:2.81 TPM:2.22
1633 A_BomoMG_comp17208_c1_seq1
245bp
FPKM:1.90 TPM:1.50
1634 A_BomoMG_comp17209_c0_seq1
510bp
 PREDICTED:_transformation/transcription_domain-associated_protein_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0000124 C SAGA complex
GO:0000281 P mitotic cytokinesis
GO:0004402 F histone acetyltransferase activity
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006909 P phagocytosis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0035222 P wing disc pattern formation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043486 P histone exchange
GO:0043966 P histone H3 acetylation
GO:0045747 P positive regulation of Notch signaling pathway
FPKM:1.95 TPM:1.54
1635 A_BomoMG_comp17210_c0_seq1
343bp
 PREDICTED:_zinc_finger_protein_37A-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.47 TPM:1.95
1636 A_BomoMG_comp17211_c0_seq1
436bp
FPKM:2.83 TPM:2.24
1637 A_BomoMG_comp17212_c0_seq1
521bp
FPKM:1.39 TPM:1.10
1638 A_BomoMG_comp172139_c0_seq1
538bp
FPKM:3.80 TPM:3.00
1639 A_BomoMG_comp17213_c0_seq1
958bp
 Protein_fat-free-like_protein_[Operophtera_brumata]
GO:0000938 C GARP complex
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0032456 P endocytic recycling
FPKM:2.01 TPM:1.59
1640 A_BomoMG_comp17213_c1_seq1
711bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_51_homolog_[Papilio_polytes]
GO:0000938 C GARP complex
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006914 P autophagy
GO:0015031 P protein transport
GO:0032456 P endocytic recycling
GO:0042147 P retrograde transport, endosome to Golgi
GO:0055037 C recycling endosome
GO:1990745 C EARP complex
FPKM:2.04 TPM:1.61
1641 A_BomoMG_comp17214_c0_seq1
415bp
 hypothetical_protein_[Pelagibacterium_halotolerans]
FPKM:2.77 TPM:2.19
1642 A_BomoMG_comp17215_c0_seq1
411bp
 PREDICTED:_probable_DNA_mismatch_repair_protein_Msh6_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0000400 F four-way junction DNA binding
GO:0000710 P meiotic mismatch repair
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008340 P determination of adult lifespan
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0009411 P response to UV
GO:0016446 P somatic hypermutation of immunoglobulin genes
GO:0016447 P somatic recombination of immunoglobulin gene segments
GO:0016887 F ATP hydrolysis activity
GO:0030983 F mismatched DNA binding
GO:0032137 F guanine/thymine mispair binding
GO:0032138 F single base insertion or deletion binding
GO:0032142 F single guanine insertion binding
GO:0032143 F single thymine insertion binding
GO:0032301 C MutSalpha complex
GO:0032357 F oxidized purine DNA binding
GO:0032405 F MutLalpha complex binding
GO:0035064 F methylated histone binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043570 P maintenance of DNA repeat elements
GO:0045190 P isotype switching
GO:0045830 P positive regulation of isotype switching
GO:0045910 P negative regulation of DNA recombination
GO:0051096 P positive regulation of helicase activity
GO:0097193 P intrinsic apoptotic signaling pathway
FPKM:1.83 TPM:1.45
1643 A_BomoMG_comp172173_c0_seq1
599bp
FPKM:4.03 TPM:3.18
1644 A_BomoMG_comp17217_c0_seq1
518bp
 E3_ubiquitin-protein_ligase_CBL_[Papilio_machaon]
GO:0001784 F phosphotyrosine residue binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0004871 F obsolete signal transducer activity
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007166 P cell surface receptor signaling pathway
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0023051 P regulation of signaling
GO:0046872 F metal ion binding
FPKM:2.70 TPM:2.14
1645 A_BomoMG_comp17218_c0_seq1
267bp
 PREDICTED:_YEATS_domain-containing_protein_4_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0008022 F protein C-terminus binding
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0045893 P positive regulation of transcription, DNA-templated
FPKM:3.42 TPM:2.70
1646 A_BomoMG_comp17219_c0_seq1
297bp
 PREDICTED:_predicted_GPI-anchored_protein_58_[Bombyx_mori]
FPKM:1.49 TPM:1.18
1647 A_BomoMG_comp17220_c0_seq1
340bp
 hypothetical_protein_RR46_04321_[Papilio_xuthus]
FPKM:2.51 TPM:1.98
1648 A_BomoMG_comp17221_c0_seq1
359bp
 PREDICTED:_ATP-binding_cassette_sub-family_G_member_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0033344 P cholesterol efflux
GO:0034041 F ABC-type sterol transporter activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
FPKM:2.99 TPM:2.36
1649 A_BomoMG_comp17221_c1_seq1
353bp
 PREDICTED:_ATP-binding_cassette_sub-family_G_member_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009897 C external side of plasma membrane
GO:0010033 P response to organic substance
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010872 P regulation of cholesterol esterification
GO:0010875 P positive regulation of cholesterol efflux
GO:0010888 P negative regulation of lipid storage
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019534 F toxin transmembrane transporter activity
GO:0030301 P cholesterol transport
GO:0032367 P intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0033993 P response to lipid
GO:0034041 F ABC-type sterol transporter activity
GO:0034374 P low-density lipoprotein particle remodeling
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043691 P reverse cholesterol transport
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0055037 C recycling endosome
GO:0055091 P phospholipid homeostasis
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:1901998 P toxin transport
FPKM:2.35 TPM:1.86
1650 A_BomoMG_comp172228_c0_seq1
1890bp
FPKM:3.06 TPM:2.42
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