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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1081 A_BomoMG_comp159070_c0_seq1
2454bp
 PREDICTED:_integrator_complex_subunit_6-A_[Papilio_machaon]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0015629 C actin cytoskeleton
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
FPKM:3.02 TPM:2.39
1082 A_BomoMG_comp159725_c0_seq1
354bp
 DNA-binding_response_regulator_[Leadbetterella_byssophila]
FPKM:2.34 TPM:1.85
1083 A_BomoMG_comp159938_c0_seq1
298bp
FPKM:2.22 TPM:1.76
1084 A_BomoMG_comp159971_c0_seq1
1281bp
 PREDICTED:_zinc_finger_protein_271-like_[Bombyx_mori]
FPKM:3.47 TPM:2.74
1085 A_BomoMG_comp159977_c0_seq1
627bp
FPKM:3.48 TPM:2.75
1086 A_BomoMG_comp159978_c0_seq1
883bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC105841417,_partial_[Bombyx_mori]
FPKM:3.63 TPM:2.87
1087 A_BomoMG_comp159980_c0_seq1
1003bp
 PREDICTED:_sulfhydryl_oxidase_2-like_isoform_X1_[Papilio_polytes]
GO:0000139 C Golgi membrane
GO:0003756 F protein disulfide isomerase activity
GO:0005615 C extracellular space
GO:0005794 C Golgi apparatus
GO:0006457 P protein folding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016242 P negative regulation of macroautophagy
GO:0016491 F oxidoreductase activity
GO:0016971 F flavin-linked sulfhydryl oxidase activity
GO:0016972 F thiol oxidase activity
GO:0030173 C integral component of Golgi membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0045171 C intercellular bridge
GO:0045454 P cell redox homeostasis
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
FPKM:2.90 TPM:2.29
1088 A_BomoMG_comp160000_c0_seq1
776bp
 leucine-zipper_of_insertion_element_IS481,_partial_[Corynebacterium_variabile]
FPKM:2.89 TPM:2.28
1089 A_BomoMG_comp160005_c0_seq1
596bp
FPKM:2.65 TPM:2.09
1090 A_BomoMG_comp160010_c0_seq1
1017bp
 odorant_receptor_60_[Athetis_dissimilis]
FPKM:3.63 TPM:2.86
1091 A_BomoMG_comp160016_c0_seq1
1212bp
 PREDICTED:_ruvB-like_helicase_1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003678 F DNA helicase activity
GO:0003713 F transcription coactivator activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0030111 P regulation of Wnt signaling pathway
GO:0031011 C Ino80 complex
GO:0032508 P DNA duplex unwinding
GO:0042127 P regulation of cell population proliferation
GO:0043141 F 5'-3' DNA helicase activity
GO:0051301 P cell division
FPKM:3.03 TPM:2.39
1092 A_BomoMG_comp160049_c0_seq1
1109bp
 PREDICTED:_sesquipedalian-1_[Papilio_machaon]
GO:0001881 P receptor recycling
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0007032 P endosome organization
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0042147 P retrograde transport, endosome to Golgi
GO:0042803 F protein homodimerization activity
GO:0055037 C recycling endosome
FPKM:3.78 TPM:2.99
1093 A_BomoMG_comp160082_c0_seq1
2017bp
 PREDICTED:_intron-binding_protein_aquarius_isoform_X3_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
FPKM:3.09 TPM:2.44
1094 A_BomoMG_comp160125_c0_seq1
1169bp
FPKM:3.12 TPM:2.47
1095 A_BomoMG_comp160127_c0_seq1
1158bp
 PREDICTED:_protein_furry_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008407 P chaeta morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030427 C site of polarized growth
GO:0035316 P non-sensory hair organization
GO:0035317 P imaginal disc-derived wing hair organization
GO:0042052 P rhabdomere development
GO:0044297 C cell body
GO:0045177 C apical part of cell
GO:0045860 P positive regulation of protein kinase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048601 P oocyte morphogenesis
GO:0048800 P antennal morphogenesis
GO:0048814 P regulation of dendrite morphogenesis
GO:0050773 P regulation of dendrite development
GO:0070593 P dendrite self-avoidance
GO:0090527 P actin filament reorganization
FPKM:3.30 TPM:2.61
1096 A_BomoMG_comp160151_c0_seq1
666bp
 PREDICTED:_nucleolar_MIF4G_domain-containing_protein_1_homolog_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
GO:0022008 P neurogenesis
GO:0042274 P ribosomal small subunit biogenesis
GO:0044822 F RNA binding
FPKM:4.29 TPM:3.39
1097 A_BomoMG_comp160159_c0_seq1
298bp
FPKM:2.47 TPM:1.95
1098 A_BomoMG_comp160193_c0_seq1
850bp
 PREDICTED:_N-terminal_Xaa-Pro-Lys_N-methyltransferase_1-A-like_[Papilio_machaon]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006480 P N-terminal protein amino acid methylation
GO:0008168 F methyltransferase activity
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018016 P N-terminal peptidyl-proline dimethylation
GO:0032259 P methylation
GO:0035568 P N-terminal peptidyl-proline methylation
GO:0042054 F histone methyltransferase activity
GO:0071885 F N-terminal protein N-methyltransferase activity
FPKM:4.70 TPM:3.71
1099 A_BomoMG_comp160203_c0_seq1
1253bp
FPKM:2.35 TPM:1.86
1100 A_BomoMG_comp160213_c0_seq1
315bp
FPKM:2.66 TPM:2.10
1101 A_BomoMG_comp160217_c0_seq1
418bp
FPKM:2.88 TPM:2.28
1102 A_BomoMG_comp160222_c0_seq1
451bp
 Histone-lysine_N-methyltransferase_SETMAR_[Acromyrmex_echinatior]
FPKM:3.30 TPM:2.61
1103 A_BomoMG_comp160270_c0_seq1
1443bp
 PREDICTED:_dihydroorotate_dehydrogenase_(quinone),_mitochondrial_isoform_X1_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0004152 F dihydroorotate dehydrogenase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005758 C mitochondrial intermembrane space
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0044205 P 'de novo' UMP biosynthetic process
GO:0055114 P obsolete oxidation-reduction process
FPKM:3.38 TPM:2.67
1104 A_BomoMG_comp160289_c0_seq1
555bp
FPKM:3.46 TPM:2.73
1105 A_BomoMG_comp160291_c0_seq1
713bp
FPKM:3.08 TPM:2.44
1106 A_BomoMG_comp160298_c0_seq1
566bp
FPKM:4.17 TPM:3.29
1107 A_BomoMG_comp160312_c0_seq1
549bp
 PREDICTED:_zinc_finger_C4H2_domain-containing_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007528 P neuromuscular junction development
GO:0016020 C membrane
GO:0021522 P spinal cord motor neuron differentiation
GO:0030054 C cell junction
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046872 F metal ion binding
FPKM:4.53 TPM:3.58
1108 A_BomoMG_comp160331_c0_seq1
801bp
FPKM:2.61 TPM:2.06
1109 A_BomoMG_comp160386_c0_seq1
1358bp
 PREDICTED:_CRAL-TRIO_domain-containing_protein_C3H8.02_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0008526 F phosphatidylinositol transfer activity
GO:0015914 P phospholipid transport
GO:0071852 P fungal-type cell wall organization or biogenesis
FPKM:2.57 TPM:2.03
1110 A_BomoMG_comp160401_c0_seq1
436bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13D,_partial_[Amyelois_transitella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
FPKM:3.35 TPM:2.64
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